Nucl. Acids Res. -- Table of Contents (20 [11, June 11 1992])

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Contents: Volume 20, Number 11    11 June 1992    [Index by Author]

       SURVEY AND SUMMARY

       MOLECULAR BIOLOGY

       CHEMISTRY

       Errata

       Author index

       GENOME STRUCTURE AND MAPPING

       FOR THE RECORD SEQUENCE

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SURVEY AND SUMMARY:

Valery Lim, Ceslovas Venclovas, Alexander Spirin, Richard Brimacombe, Philip Mitchell, and Florian Müller: How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography
Nucl. Acids Res. 1992 20: 2627-2637; doi:10.1093/nar/20.11.2627 [Abstract] [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

Daniel F. Bogenhagen and Mark S. Sands: Binding of TFIIIA to derivatives of 5S RNA containing sequence substitutions or deletions defines a minimal TFIIIA binding site
Nucl. Acids Res. 1992 20: 2639-2645; doi:10.1093/nar/20.11.2639 [Abstract] [Print PDF] [Request Permissions]

Peter J.T. Dekker, Jeroen Stuurman, Katinka van Oosterum, and Leslie A. Grivell: Determinants for binding of a 40 kDa protein to the leaders of yeast mitochondrial mRNAs
Nucl. Acids Res. 1992 20: 2647-2655; doi:10.1093/nar/20.11.2647 [Abstract] [Print PDF] [Request Permissions]

Bernd Hentsch, Athanasia Mouzaki, Isolde Pfeuffer, Duri Rungger, and Edgar Serfling: The weak, fine-tuned binding of ubiquitous transcription factors to the II-2 enhancer contributes to its T cell-restricted activity
Nucl. Acids Res. 1992 20: 2657-2665; doi:10.1093/nar/20.11.2657 [Abstract] [Print PDF] [Request Permissions]

Johanne M. Murray, Claudette L. Doe, Paul Schenk, Antony M. Carr, Alan R. Lehmann, and Felicity Z. Watts: Cloning and characterisation of the S.pombe rad15 gene, a homologue to the S.cerevisiae RAD3 and human ERCC2 genes
Nucl. Acids Res. 1992 20: 2673-2678; doi:10.1093/nar/20.11.2673 [Abstract] [Print PDF] [Request Permissions]

Hildburg Beier, Mimi C. Lee, Takao Sekiya, Yoshiyuki Kuchino, and Susumu Nishimura: Two nucleotides next to the anticodon of cytoplasmic rat tRNA^ASP are likely generated by RNA editing
Nucl. Acids Res. 1992 20: 2679-2683; doi:10.1093/nar/20.11.2679 [Abstract] [Print PDF] [Request Permissions]

Atsushi Higashitani, David Greenstein, and Kensuke Horiuchi: A single amino acid substitution reduces the superhelicity requirement of a replication initiator protein
Nucl. Acids Res. 1992 20: 2685-2691; doi:10.1093/nar/20.11.2685 [Abstract] [Print PDF] [Request Permissions]

Nicholas P. Davies, Ian R. Rosewell, and Marianne Brüggemann: Targeted alterations in yeast artificial chromosomes for inter-species gene transfer
Nucl. Acids Res. 1992 20: 2693-2698; doi:10.1093/nar/20.11.2693 [Abstract] [Print PDF] [Request Permissions]

Marie-Ange Majérus, Frédéric Bibollet-Ruche, Jean-Baptiste Telliez, Bohdan Wasylyk, and Bernard Bailleul: Serum, AP-1 and Ets-1 stimulate the human ets-1 promoter
Nucl. Acids Res. 1992 20: 2699-2703; doi:10.1093/nar/20.11.2699 [Abstract] [Print PDF] [Request Permissions]

Katsunori Tanaka, Hiroshi Sakai, Yoichi Honda, Toshiaki Nakamura, Akihisa Higashi, and Tohru Komano: Structural and functional features of cis-acting sequences in the basic replicon of plasmid Collb-P9
Nucl. Acids Res. 1992 20: 2705-2710; doi:10.1093/nar/20.11.2705 [Abstract] [Print PDF] [Request Permissions]

Francesca M. Pisani, Ciro De Martino, and Mosè Rossi: A DNA polymerase from the archaeon Sulfolobus solfataricus shows sequence similarity to family B DNA polymerases
Nucl. Acids Res. 1992 20: 2711-2716; doi:10.1093/nar/20.11.2711 [Abstract] [Print PDF] [Request Permissions]

Arndt von Haeseler, Beat Blum, Larry Simpson, Nancy Sturm, and Michael S. Waterman: Computer methods for locating kinetoplastid cryptogenes
Nucl. Acids Res. 1992 20: 2717-2724; doi:10.1093/nar/20.11.2717 [Abstract] [Print PDF] [Request Permissions]

Joost C.B.M. Zomerdijk, Rudo Kieft, and Piet Borst: A ribosomal RNA gene promoter at the telomere of a mini-chromosome in Trypanosoma brucei
Nucl. Acids Res. 1992 20: 2725-2734; doi:10.1093/nar/20.11.2725 [Abstract] [Print PDF] [Request Permissions]

Peter E. Nielsen: Uranyl photofootprinting of triple helical DNA
Nucl. Acids Res. 1992 20: 2735-2739; doi:10.1093/nar/20.11.2735 [Abstract] [Print PDF] [Request Permissions]

Edward D. Lamperti, J.Matthew Kittelberger, Temple F. Smith, and Lydia VillaKomaroff: Corruption of genomic databases with anomalous sequence
Nucl. Acids Res. 1992 20: 2741-2747; doi:10.1093/nar/20.11.2741 [Abstract] [Print PDF] [Request Permissions]

Luc Daigneault, Allison Haggarty, Qiang Hua Meng, and Daniel Skup: Two distinct pathways of interferon induction as revealed by 2-aminopurine
Nucl. Acids Res. 1992 20: 2749-2754; doi:10.1093/nar/20.11.2749 [Abstract] [Print PDF] [Request Permissions]

Jorge Filmus, Jacek Remani, and Michel H. Klein: Synergistic induction of promoters containing metal- and glucocorticoid-responsive elements
Nucl. Acids Res. 1992 20: 2755-2760; doi:10.1093/nar/20.11.2755 [Abstract] [Print PDF] [Request Permissions]

N. Rodriguez-Cousiño and R. Esteban: Both yeast W double-stranded RNA and its single-stranded form 20S RNA are linear
Nucl. Acids Res. 1992 20: 2761-2766; doi:10.1093/nar/20.11.2761 [Abstract] [Print PDF] [Request Permissions]

Natalia M. Romero, Victor Parro, Francisco Malpartida, and Rafael P. Mellado: Heterologous activation of the actinorhodin biosynthetic pathway in Streptomyces lividans
Nucl. Acids Res. 1992 20: 2767-2772; doi:10.1093/nar/20.11.2767 [Abstract] [Print PDF] [Request Permissions]

Virginia Balke, Valakunja Nagaraja, Tracy Gindlesperger, and Stanley Hattman: Functionally distinct RNA polymerase binding sites in the phage Mu mom promoter region
Nucl. Acids Res. 1992 20: 2777-2784; doi:10.1093/nar/20.11.2777 [Abstract] [Print PDF] [Request Permissions]

Marcel J.A. de Groot, Remko Offringa, Mirjam P. Does, Paul J.J. Hooykaas, and Peter J.M. van den Elzen: Mechanisms of intermolecular homologous recombination in plants as studied with single- and double-stranded DNA molecules
Nucl. Acids Res. 1992 20: 2785-2794; doi:10.1093/nar/20.11.2785 [Abstract] [Print PDF] [Request Permissions]

Jo Anne Powell, Jose Galindo, and Richard A. Firtel: A negative transcriptional control region of a developmentally-regulated genè co-localizes with the origin of replication of an endogenous plasmid in Dictyostelium
Nucl. Acids Res. 1992 20: 2795-2802; doi:10.1093/nar/20.11.2795 [Abstract] [Print PDF] [Request Permissions]

Daniel Metzger, Régine Losson, Jean-Marc Bornert, Yves Lemoine, and Pierre Chambon: Promoter specificity of the two transcriptional activation functions of the human oestrogen receptor in yeast
Nucl. Acids Res. 1992 20: 2813-2817; doi:10.1093/nar/20.11.2813 [Abstract] [Print PDF] [Request Permissions]

Edward H. Birkenmeier, Peter C. Hoppe, Kimberly A. Lyford, and Babette Gwynn: Tissue- and cell-specific expression of human sn-glycerol-3-phosphate dehydrogenase in transgenic mice
Nucl. Acids Res. 1992 20: 2819-2825; doi:10.1093/nar/20.11.2819 [Abstract] [Print PDF] [Request Permissions]

Patrick S. Burke and Debra J. Wolgemuth: Zfp-37, a new murine zinc finger encoding gene, is expressed in a developmentally regulated pattern in the male germ line
Nucl. Acids Res. 1992 20: 2827-2834; doi:10.1093/nar/20.11.2827 [Abstract] [Print PDF] [Request Permissions]

Bharat M. Chowrira and John M. Burke: Extensive phosphorothioate substitution yields highly active and nuclease-resistant hairpin ribozymes
Nucl. Acids Res. 1992 20: 2835-2840; doi:10.1093/nar/20.11.2835 [Abstract] [Print PDF] [Request Permissions]

Timothy W. Gant, Jeffrey A. Silverman, and Snorri S. Thorgeirsson: Regulation of P-glycoprotein gene expression in hepatocyte cultures and liver cell lines by a trans-acting transcriptional repressor
Nucl. Acids Res. 1992 20: 2841-2846; doi:10.1093/nar/20.11.2841 [Abstract] [Print PDF] [Request Permissions]

Joyce M. Sherman, M.John Rogers, and Dieter Söll: Competition of aminoacyl-tRNA synthetases for tRNA ensures the accuracy of aminoacylation
Nucl. Acids Res. 1992 20: 2847-2852; doi:10.1093/nar/20.11.2847 [Abstract] [Print PDF] [Request Permissions]

Nathalie Duchange, Alberto Ochoa, Gregory D. Plowman, Anne Rozé, Mardjan Amdjadi, and Mario M. Zakin: Identification of an enhancer involved in the melanoma-specific expression of the tumor antigen melanotransferrin gene
Nucl. Acids Res. 1992 20: 2853-2859; doi:10.1093/nar/20.11.2853 [Abstract] [Print PDF] [Request Permissions]

David Landsman: RNP-1, an RNA-binding motif is conserved in the DNA-binding cold shock domain
Nucl. Acids Res. 1992 20: 2861-2864; doi:10.1093/nar/20.11.2861 [Abstract] [Print PDF] [Request Permissions]

Shao-Ling Fong: Characterization of the human rod transducin alpha-subunit gene
Nucl. Acids Res. 1992 20: 2865-2870; doi:10.1093/nar/20.11.2865 [Abstract] [Print PDF] [Request Permissions]

Graziano Pesole, Nicola Prunella, Sabino Liuni, Marcella Attimonelli, and Cecilia Saccone: WORDUP: an efficient algorithm for discovering statistically significant patterns in DNA sequences
Nucl. Acids Res. 1992 20: 2871-2875; doi:10.1093/nar/20.11.2871 [Abstract] [Print PDF] [Request Permissions]

W.-C. Au, N.B.K. Raj, R. Pine, and P.M. Pitha: Distinct activation of murine interferon- ${alpha}$ promoter region by IRF-1/ISFG-2 and virus infection
Nucl. Acids Res. 1992 20: 2877-2884; doi:10.1093/nar/20.11.2877 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

Peter A. Beal and Peter B. Dervan: The influence of single base triplet changes on the stability of a Pur·Pur·Pyr triple helix determined by affinity cleaving
Nucl. Acids Res. 1992 20: 2773-2776; doi:10.1093/nar/20.11.2773 [Abstract] [Print PDF] [Request Permissions]

Hays S. Rye, Stephen Yue, David E. Wemmer, Mark A. Quesada, Richard P. Haugland, Richard A. Mathies, and Alexander N. Glazer: Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes: properties and applications
Nucl. Acids Res. 1992 20: 2803-2812; doi:10.1093/nar/20.11.2803 [Abstract] [Print PDF] [Request Permissions]

Errata:

M. Tewari, K.L. Mohm, F.E. Yue, and R. Taub: Sequence of rat RL/IF-1 encoding IKBß-like activity and comparison with related proteins containing notch-like repeats
Nucl. Acids Res. 1992 20: 2931; doi:10.1093/nar/20.11.2931 [Abstract] [Print PDF] [Request Permissions]

J.M. Sherman, M.J. Ropers, and D. Söll: Competition of aminoacyl-tRNA synthetases for tRNA ensures the accuracy of aminoacylation
Nucl. Acids Res. 1992 20: 2931; doi:10.1093/nar/20.11.2931-a [Abstract] [Print PDF] [Request Permissions]

Author index:

: Author index
Nucl. Acids Res. 1992 20: 2929-2930; doi:10.1093/nar/20.11.2929 [Print PDF] [Request Permissions]

GENOME STRUCTURE AND MAPPING:

Jef M. Hammond, Shona M. Kerr, Geoffrey L. Smith, and Linda K. Dixon: An African swine fever virus gene with homology to DNA ligases
Nucl. Acids Res. 1992 20: 2667-2671; doi:10.1093/nar/20.11.2667 [Abstract] [Print PDF] [Request Permissions]

FOR THE RECORD SEQUENCE:

Chikara Masuta, Shigeru Kuwata, Toshiake Matzuzaki, Yoichi Takanami, and Akira Koiwai: A plant virus satellite RNA exhibits a significant sequence complementarity to a chloroplast tRNA
Nucl. Acids Res. 1992 20: 2885; doi:10.1093/nar/20.11.2885 [Print PDF] [Request Permissions]

Aniello Crescenzi, Francesco Grieco, and Donato Gallitelli: Nucleotide sequence of a satellite RNA of a strain of cucumber mosaic virus associated with a tomato fruit necrosis
Nucl. Acids Res. 1992 20: 2886; doi:10.1093/nar/20.11.2886 [Print PDF] [Request Permissions]

Paul Denny, Sally Swift, Nigel Brand, Nina Dabhade, Paul Barton, and Alan Ashworth: A conserved family of genes related to the testis determining gene, SRY
Nucl. Acids Res. 1992 20: 2887; doi:10.1093/nar/20.11.2887 [Print PDF] [Request Permissions]

Carol Polisson and Derek Robinson: Apol, a unique restriction endonuclease from Arthrobacter protophormiae which recognizes 5' RAATTY 3'
Nucl. Acids Res. 1992 20: 2888; doi:10.1093/nar/20.11.2888 [Print PDF] [Request Permissions]

Marc Van Ranst, Ruth Tachezy, Jeanne Pruss, and Robert D. Burk: Primary structure of the E6 protein of Micromys minutus papillomavirus and Mastomys natalensis papillomavirus
Nucl. Acids Res. 1992 20: 2889; doi:10.1093/nar/20.11.2889 [Print PDF] [Request Permissions]

Sandeep Shankar and Anil K. Tyagi: MfoAI, a novel isoschizomer of HaeIII from Mycobacterium fortuitum recognizing 5'-GG/CC-3'
Nucl. Acids Res. 1992 20: 2890; doi:10.1093/nar/20.11.2890 [Print PDF] [Request Permissions]

Sandeep Shankar and Anil K. Tyagi: MhaAI, a novel isoschizomer of PstI from Mycobacterium habana recognizing 5'-CTGCA/G-3'
Nucl. Acids Res. 1992 20: 2891; doi:10.1093/nar/20.11.2891 [Print PDF] [Request Permissions]

J.A. Lenstra: Bovine sequences in rodent DNA
Nucl. Acids Res. 1992 20: 2892; doi:10.1093/nar/20.11.2892 [Print PDF] [Request Permissions]

Martin P. Vazquez, Alejandro G. Schijman, Alfredo Panebra, and Mariano J. Levin: Nucleotide sequence of a cDNA encoding another Trypanosoma cruzi acidic ribosomal P2 type protein (TcP2b)
Nucl. Acids Res. 1992 20: 2893; doi:10.1093/nar/20.11.2893 [Print PDF] [Request Permissions]

Alejandro G. Schijman and Mariano J. Levin: Nucleotide sequence of a cDNA encoding a Trypanosoma cruzi acidic ribosomal PO protein: a novel C-terminal domain in T.cruzi ribosomal P proteins
Nucl. Acids Res. 1992 20: 2894; doi:10.1093/nar/20.11.2894 [Print PDF] [Request Permissions]

Jack A. Taylor, Yu Li, Ming You, Allen J. Wilcox, and Edison Liu: B region variant of the estrogen receptor gene
Nucl. Acids Res. 1992 20: 2895; doi:10.1093/nar/20.11.2895 [Print PDF] [Request Permissions]

Michael A. Eldarov, Igor V. Karpichev, Olga T. Samko, Nina V. Anikeitcheva, Alexey A. Kalugin, Ella B. Khoroshoutina, and Nikolai N. Sokolov: Characterisation of BciBII, an isoschizomer of BstNI from a strain of Bacillus circulans B
Nucl. Acids Res. 1992 20: 2896; doi:10.1093/nar/20.11.2896 [Print PDF] [Request Permissions]

Nikolai N. Sokolov, Andrey B. Fitzner, Michael A. Eldarov, Nina B. Anikeicheva, Alexey A. Kalugin, Olga T. Samko, Ella B. Khoroshoutina, and Ishtvan Fodor: BavAI, a restriction endonuclease from Bacillus alvei
Nucl. Acids Res. 1992 20: 2897; doi:10.1093/nar/20.11.2897 [Print PDF] [Request Permissions]

Michael A. Eldarov, Igor V. Karpichev, Olga T. Samko, Nina V. Anikeitcheva, Alexey A. Kalugin, Ella B. Khoroshoutina, and Nikolai N. Sokolov: Isolation and characterisation of restriction endonuclease BcuAI from Bacillus cereus A
Nucl. Acids Res. 1992 20: 2898; doi:10.1093/nar/20.11.2898 [Print PDF] [Request Permissions]

Ian N. Hampson, Lynne Pope, Graham J. Cowling, and T. Michael Dexter: Chemical cross linking subtraction (CCLS): a new method for the generation of subtractive hybridisation probes
Nucl. Acids Res. 1992 20: 2899; doi:10.1093/nar/20.11.2899 [Print PDF] [Request Permissions]

Patrick Froussard: A random-PCR method (rPCR) to construct whole cDNA library from low amounts of RNA
Nucl. Acids Res. 1992 20: 2900; doi:10.1093/nar/20.11.2900 [Print PDF] [Request Permissions]

Sharon L. Silins, Victor P. Argaet, and Thomas B. Sculley: Isolation of Epstein - Barr virus genomes using pulse-field gel electrophoresis
Nucl. Acids Res. 1992 20: 2901; doi:10.1093/nar/20.11.2901 [Print PDF] [Request Permissions]

Maurice J.B. van den Hoff, Antoon F.M. Moorman, and Wouter H. Lamers: Electroporation in ‘intracellular’ buffer increases cell survival
Nucl. Acids Res. 1992 20: 2902; doi:10.1093/nar/20.11.2902 [Print PDF] [Request Permissions]

Ping Fu and Bronwyn Evans: A novel PCR method for amplifying exons (or genes) over intragenic (or intergenic) regions in the genome
Nucl. Acids Res. 1992 20: 2903; doi:10.1093/nar/20.11.2903 [Print PDF] [Request Permissions]

: New nucleotide sequence data on the EMBL File Server
Nucl. Acids Res. 1992 20: 2905-2927; doi:10.1093/nar/20.11.2905 [Print PDF] [Request Permissions]