Nucl. Acids Res. -- Table of Contents (20 [24, December 25 1992])

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Contents: Volume 20, Number 24    25 December 1992    [Index by Author]

       SURVEY AND SUMMARY

       MOLECULAR BIOLOGY

       CHEMISTRY

       METHODS

       Annual Subject index

       Author index

       ENZYMOLOGY

       GENOME STRUCTURE AND MAPPING

       SEQUENCE

       STRUCTURAL BIOLOGY

       NUCLEOTIDE SEQUENCE UPDATE

Other Issues:

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SURVEY AND SUMMARY:

James W. Fickett and Chang-Shung Tung: Assessment of protein coding measures
Nucl. Acids Res. 1992 20: 6441-6450; doi:10.1093/nar/20.24.6441 [Abstract] [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

Janine Huet and André Sentenac: The TATA-binding protein participates in TFIIIB assembly on tRNA genes
Nucl. Acids Res. 1992 20: 6451-6454; doi:10.1093/nar/20.24.6451 [Abstract] [Print PDF] [Request Permissions]

Stewart J. McKay and Howard Cooke: hnRNP A2/B1 binds specifically to single stranded vertebrate telomeric repeat TTAGGG_n
Nucl. Acids Res. 1992 20: 6461-6464; doi:10.1093/nar/20.24.6461 [Abstract] [Print PDF] [Request Permissions]

Shigenori Iwai, Clare Pritchard, Derek A. Mann, Jonathan Karn, and Michael J. Gait: Recognition of the high affinity binding site in rev-response element RNA by the Human Immunodeficiency Virus type-1 rev protein
Nucl. Acids Res. 1992 20: 6465-6472; doi:10.1093/nar/20.24.6465 [Abstract] [Print PDF] [Request Permissions]

Chuck C.-K. Chao and Sue Lin-Chao: A direct-repeat sequence of the human BiP gene is required for A23187-mediated inducibility and an inducible nuclear factor binding
Nucl. Acids Res. 1992 20: 6481-6485; doi:10.1093/nar/20.24.6481 [Abstract] [Print PDF] [Request Permissions]

Keith R. Fox: Probing the conformations of eight cloned-DNA dodecamers; CGCGAATTCGCG, CGCGTTAACGCG, CGCGTATACGCG, CGCGATATCGCG, CGCAAATTTGCG, CGCTTTAAAGCG, CGCGGATCCGCG and CGCGGTACCGCG
Nucl. Acids Res. 1992 20: 6487-6493; doi:10.1093/nar/20.24.6487 [Abstract] [Print PDF] [Request Permissions]

Bengt Hallberg, Anders Thornell, Magnus Holm, and Thomas Grundström: SEF1 binding is important for T cell specific enhancers of genes for T cell receptor-CD3 subunits
Nucl. Acids Res. 1992 20: 6495-6499; doi:10.1093/nar/20.24.6495 [Abstract] [Print PDF] [Request Permissions]

H. Kasai, S. Isono, M. Kitakawa, J. Mineno, H. Akiyama, D.M. Kurnit, D.E. Berg, and K. Isono: Efficient large-scale sequencing of the Escherichia coli genome: implementation of a transposon- and PCR-based strategy for the analysis of ordered ${lambda}$ phage clones
Nucl. Acids Res. 1992 20: 6509-6515; doi:10.1093/nar/20.24.6509 [Abstract] [Print PDF] [Request Permissions]

Tongtong Wang and C. David Allis: Replication-dependent and independent regulation of HMG expression during the cell cycle and conjugation in Tetrahymena
Nucl. Acids Res. 1992 20: 6525-6533; doi:10.1093/nar/20.24.6525 [Abstract] [Print PDF] [Request Permissions]

T. Basic-Zaninovic, F. Palombo, M. Bignami, and E. Dogliotti: Fidelity of replication of the leading and the lagging DNA strands opposite N-methyl-N-nitrosourea-induced DNA damage in human cells
Nucl. Acids Res. 1992 20: 6543-6548; doi:10.1093/nar/20.24.6543 [Abstract] [Print PDF] [Request Permissions]

Gert M. Bolwig, Joseph T. Bruder, and Patrick Hearing: Different binding site requirements for binding and activation for the bipartite enhancer factor EF-1A
Nucl. Acids Res. 1992 20: 6555-6564; doi:10.1093/nar/20.24.6555 [Abstract] [Print PDF] [Request Permissions]

Johan Edqvist, Henri Grosjean, and Kerstin B. Stråby: Identity elements for N²-dimethylation of guanosine-26 in yeast tRNAs
Nucl. Acids Res. 1992 20: 6575-6581; doi:10.1093/nar/20.24.6575 [Abstract] [Print PDF] [Request Permissions]

Andrew J. Pierce, Robert C. Jambou, David E. Jensen, and Jane Clifford Azizkhan: A conserved DNA structural control element modulates transcription of a mammalian gene
Nucl. Acids Res. 1992 20: 6583-6587; doi:10.1093/nar/20.24.6583 [Abstract] [Print PDF] [Request Permissions]

James D. Lauderdale and Arnold Stein: Introns of the chicken ovalbumin gene promote nucleosome alignment in vitro
Nucl. Acids Res. 1992 20: 6589-6596; doi:10.1093/nar/20.24.6589 [Abstract] [Print PDF] [Request Permissions]

Kathleen W. Scotto, Honghao Yang, Joseph P. Davide, and Peter W. Melera: Differential utilization of poly (A) signals between DHFR alleles in CHL cells
Nucl. Acids Res. 1992 20: 6597-6604; doi:10.1093/nar/20.24.6597 [Abstract] [Print PDF] [Request Permissions]

Rainer P. Birkenbihl and Suresh Subramani: Cloning and characterization of rad21 an essential gene of Schizosaccharomyces pombe involved in DNA double-strand-break repair
Nucl. Acids Res. 1992 20: 6605-6611; doi:10.1093/nar/20.24.6605 [Abstract] [Print PDF] [Request Permissions]

Wenlan Wang, Rose Skopp, Margaret Scofield, and Carolyn Price: Euplotes crassus has genes encoding telomere-binding proteins and telomere-binding protein homologs
Nucl. Acids Res. 1992 20: 6621-6629; doi:10.1093/nar/20.24.6621 [Abstract] [Print PDF] [Request Permissions]

Tomoe Muraiso, Shigetoshi Nomoto, Hajime Yamazaki, Yukio Mishima, and Ryo Kominami: A single-stranded DNA binding protein from mouse tumor cells specifically recognizes the C-rich strand of the (AGG:CCT)_n repeats that can alter DNA conformation
Nucl. Acids Res. 1992 20: 6631-6635; doi:10.1093/nar/20.24.6631 [Abstract] [Print PDF] [Request Permissions]

Daniela Castanotto and John J. Rossi: Small sequence insertions within the branch point region dictate alternative sites of lariat formation in a yeast intron
Nucl. Acids Res. 1992 20: 6649-6655; doi:10.1093/nar/20.24.6649 [Abstract] [Print PDF] [Request Permissions]

Leslie A. Kerrigan and James T. Kadonaga: Periodic binding of individual core histones to DNA: inadvertent purification of the core histone H2B as a putative enhancer-binding factor
Nucl. Acids Res. 1992 20: 6673-6680; doi:10.1093/nar/20.24.6673 [Abstract] [Print PDF] [Request Permissions]

Umberto Pace, Andrea D. Branch, and Hugh D. Robertson: Generation of viroid conformational isomers that are stable to incubation with magnesium ions and in a nuclear extract from tomato plants
Nucl. Acids Res. 1992 20: 6681-6686; doi:10.1093/nar/20.24.6681 [Abstract] [Print PDF] [Request Permissions]

Egil Kvam, Trond Stokke, Johan Moan, and Harald B. Steen: Plateau distributions of DNA fragment lengths produced by extended light exposure of extranuclear photosensitizers in human cells
Nucl. Acids Res. 1992 20: 6687-6693; doi:10.1093/nar/20.24.6687 [Abstract] [Print PDF] [Request Permissions]

Felix Hoppe-Seyler and Karin Butz: Activation of human papillomavirus type 18 E6–E7 oncogene expression by transcription factor Sp1
Nucl. Acids Res. 1992 20: 6701-6706; doi:10.1093/nar/20.24.6701 [Abstract] [Print PDF] [Request Permissions]

James F. Kane, Bernard N. Violand, Daniel F. Curran, Nicholas R. Staten, Kevin L. Duffin, and Gregg Bogosian: Novel in-frame two codon translational hop during synthesis of bovine placental lactogen in a recombinant strain of Escherichia coli
Nucl. Acids Res. 1992 20: 6707-6712; doi:10.1093/nar/20.24.6707 [Abstract] [Print PDF] [Request Permissions]

Tord Hjalt, E. Gerhart, and H. Wagner: The effect of loop size in antisense and target RNAs on the efficiency of antisense RNA control
Nucl. Acids Res. 1992 20: 6723-6732; doi:10.1093/nar/20.24.6723 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

V. Gervais, A. Guy, R. Téoule, and G. V. Fazakerley: Solution conformation of an oligonucleotide containing a urea deoxyribose residue in front of a thymine
Nucl. Acids Res. 1992 20: 6455-6460; doi:10.1093/nar/20.24.6455 [Abstract] [Print PDF] [Request Permissions]

M.-J. Pillaire, G. Villani, J.-S. Hoffmann, A.-M. Mazard, and M. Defais: Characterization and localization of cis-diamminedichloro-platinum(II) adducts on a purified oligonucleotide containing the codons 12 and 13 of H-ras proto-oncogene
Nucl. Acids Res. 1992 20: 6473-6479; doi:10.1093/nar/20.24.6473 [Abstract] [Print PDF] [Request Permissions]

C.A. Laughton and S. Neidle: Prediction of the structure of the Y⁺·R^–·R⁺ -type DNA triple helix by molecular modelling
Nucl. Acids Res. 1992 20: 6535-6541; doi:10.1093/nar/20.24.6535 [Abstract] [Print PDF] [Request Permissions]

Masad J. Damha, Kanjana Ganeshan, Robert H.E. Hudson, and Steven V. Zabarylo: Solid-phase synthesis of branched oligoribonucleotides related to messenger RNA splicing intermediates
Nucl. Acids Res. 1992 20: 6565-6573; doi:10.1093/nar/20.24.6565 [Abstract] [Print PDF] [Request Permissions]

Achim E. Karger, Robert Weiss, and Raymond F. Gesteland: Digital chemiluminescence imaging of DNA sequencing blots using a charge-coupled device camera
Nucl. Acids Res. 1992 20: 6657-6665; doi:10.1093/nar/20.24.6657 [Abstract] [Print PDF] [Request Permissions]

Nassim Usman, Martin Egli, and Alexander Rich: Large scale chemical synthesis, purification and crystallization of RNA-DNA chimeras
Nucl. Acids Res. 1992 20: 6695-6699; doi:10.1093/nar/20.24.6695 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Sari Pennings, Geert Meersseman, and E.Morton Bradbury: Effect of glycerol on the separation of nucleosomes and bent DNA in low ionic strength polyacrylamide gel electrophoresis
Nucl. Acids Res. 1992 20: 6667-6672; doi:10.1093/nar/20.24.6667 [Abstract] [Print PDF] [Request Permissions]

George H. Gauss and Michael R. Lieber: DEAE-dextran enhances electroporation of mammalian cells
Nucl. Acids Res. 1992 20: 6739-6740; doi:10.1093/nar/20.24.6739 [Print PDF] [Request Permissions]

Alexey Savov, Dora Angelicheva, Albena Jordanova, Anton Eigel, and Luba Kalaydjieva: High percentage acrylamide gels improve resolution in SSCP analysis
Nucl. Acids Res. 1992 20: 6741-6742; doi:10.1093/nar/20.24.6741 [Print PDF] [Request Permissions]

Kenneth E. Dombrowski and Stephen E. Wright: Construction of a multiple mucin tandem repeat with a mutation in the tumor-specific epitope by a solid-phase gene assembly protocol
Nucl. Acids Res. 1992 20: 6743-6744; doi:10.1093/nar/20.24.6743 [Print PDF] [Request Permissions]

Eric van den Akker, Jacqueline E.F. Braun, Gerard Pals, M. Vincent, M. Lafleur, and Jan Retel: Single base mutations can be unequivocally and rapidly detected by analysis of DNA heteroduplexes, obtained with deletion-mutant instead of wild-type DNA
Nucl. Acids Res. 1992 20: 6745-6746; doi:10.1093/nar/20.24.6745 [Print PDF] [Request Permissions]

Jonathan McCusker, Michael T. Dawson, David Noone, Frank Gannon, and Terry Smith: Improved method for direct PCR amplification from whole blood
Nucl. Acids Res. 1992 20: 6747; doi:10.1093/nar/20.24.6747 [Print PDF] [Request Permissions]

Annual Subject index:

: Subject index
Nucl. Acids Res. 1992 20: 6771-6785; doi:10.1093/nar/20.24.6771 [Print PDF] [Request Permissions]

: Subject index
Nucl. Acids Res. 1992 20: 6787-6800; doi:10.1093/nar/20.24.6787 [Print PDF] [Request Permissions]

Author index:

: Author index
Nucl. Acids Res. 1992 20: 6769; doi:10.1093/nar/20.24.6769 [Print PDF] [Request Permissions]

ENZYMOLOGY:

Guo-Liang Xu, Wolfgang Kapfer, Jörn Walter, and Thomas A. Trautner: BsuBI—an isospecific restriction and modification system of PstI: characterization of the BsuBI genes and enzymes
Nucl. Acids Res. 1992 20: 6517-6523; doi:10.1093/nar/20.24.6517 [Abstract] [Print PDF] [Request Permissions]

Pascale Legault, Daniel Herschlag, Daniel W. Celander, and Thomas R. Cech: Mutations at the guanosine-binding site of the Tetrahymena ribozyme also affect site-specific hydrolysis
Nucl. Acids Res. 1992 20: 6613-6619; doi:10.1093/nar/20.24.6613 [Abstract] [Print PDF] [Request Permissions]

Janet E. Yancey-Wrona and Steven W. Matson: Bound Lac repressor protein differentially inhibits the unwinding reactions catalyzed by DNA helicases
Nucl. Acids Res. 1992 20: 6713-6721; doi:10.1093/nar/20.24.6713 [Abstract] [Print PDF] [Request Permissions]

GENOME STRUCTURE AND MAPPING:

Jörk Nölling, Freek J.M.van Eeden, Rik I.L. Eggen, and Willem M. de Vos: Modular organization of related Archaeal plasmids encoding different restriction-modification systems in Methanobacterium thermoformicicum
Nucl. Acids Res. 1992 20: 6501-6507; doi:10.1093/nar/20.24.6501 [Abstract] [Print PDF] [Request Permissions]

SEQUENCE:

Francesco Grieco, Fabrizio Cillo, Loredana Barbarossa, and Donato Gallitelli: Nucleotide sequence of a cucumber mosaic virus satellite RNA associated with a tomato top stunting
Nucl. Acids Res. 1992 20: 6733; doi:10.1093/nar/20.24.6733 [Print PDF] [Request Permissions]

Hideharu Taira, Katsuyoshi Kamiie, Asako Kakuta, Hirokatsu Ooura, Shogo Matsumoto, Shin-ichiro Ejiri, and Teizo Katsumata: Nucleotide sequence of the cDNA encoding silk gland elongation factor 1ß'
Nucl. Acids Res. 1992 20: 6734; doi:10.1093/nar/20.24.6734 [Print PDF] [Request Permissions]

Aixia Zhang and Marlene Belfort: Nucleotide sequence of a newly-identified Escherichia coli gene, stpA, encoding an H-NS-like protein
Nucl. Acids Res. 1992 20: 6735; doi:10.1093/nar/20.24.6735 [Print PDF] [Request Permissions]

Da-Wei Gong, Satoshi Hasegawa, Keiji Wada, Robert G. Roeder, Yoshihiro Nakatani, and Masami Horikoshi: Elucidation of three putative structural subdomains by comparison of primary structure of Xenopus and human RAP74
Nucl. Acids Res. 1992 20: 6736; doi:10.1093/nar/20.24.6736 [Print PDF] [Request Permissions]

Kazuko Yamaguchi-Shinozaki and Kazuo Shinozaki: A novel Arabidopsis DNA binding protein contains the conserved motif of HMG-box proteins
Nucl. Acids Res. 1992 20: 6737; doi:10.1093/nar/20.24.6737 [Print PDF] [Request Permissions]

Stanislaw Piechula, Jozef Kur, Krzysztof Bielawski, and Anna J. Podhajska: Isolation and identification of the restriction endonuclease Ptal from Phormidium tadzschicicum, an isoschizomer of BspMII
Nucl. Acids Res. 1992 20: 6738; doi:10.1093/nar/20.24.6738 [Print PDF] [Request Permissions]

STRUCTURAL BIOLOGY:

Edvards Liepinsh, Gottfried Otting, and Kurt Wüthrich: NMR observation of individual molecules of hydration water bound to DNA duplexes: direct evidence for a spine of hydration water present in aqueous solution
Nucl. Acids Res. 1992 20: 6549-6553; doi:10.1093/nar/20.24.6549 [Abstract] [Print PDF] [Request Permissions]

Craig Bingman, Sanjeev Jain, Gerald Zon, and Muttaiya Sundaralingam: Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG)
Nucl. Acids Res. 1992 20: 6637-6647; doi:10.1093/nar/20.24.6637 [Abstract] [Print PDF] [Request Permissions]

NUCLEOTIDE SEQUENCE UPDATE:

: New nucleotide sequence data on the EMBL File Server
Nucl. Acids Res. 1992 20: 6749-6767; doi:10.1093/nar/20.24.6749 [Print PDF] [Request Permissions]

Nucleic Acids Research