Nucl. Acids Res. -- Table of Contents (20 [7, April 11 1992])

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Contents: Volume 20, Number 7    11 April 1992    [Index by Author]

       SURVEY AND SUMMARY

       MOLECULAR BIOLOGY

       CHEMISTRY

       METHODS

       Corrigendum

       Errata

       Author index

       ENZYMOLOGY

       GENOME STRUCTURE AND MAPPING

       FOR THE RECORD SEQUENCE

       NUCLEOTIDE SEQUENCE UPDATE

Other Issues:

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SURVEY AND SUMMARY:

James W. Brown and Norman P. Pace: Ribonuclease P RNA and protein subunits from bacteria
Nucl. Acids Res. 1992 20: 1451-1456; doi:10.1093/nar/20.7.1451 [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

H.M. Mahbubani, T. Paull, J.K. EIder, and J.J. Blow: DNA replication initiates at multiple sites on plasmid DNA in Xenopus egg extracts
Nucl. Acids Res. 1992 20: 1457-1462; doi:10.1093/nar/20.7.1457 [Abstract] [Print PDF] [Request Permissions]

Olivier Hyrien and Marcel Méchali: Plasmid replication in Xenopus eggs and egg extracts: a 2D gel electrophoretic analysis
Nucl. Acids Res. 1992 20: 1463-1469; doi:10.1093/nar/20.7.1463 [Abstract] [Print PDF] [Request Permissions]

Dieter Müller, Monika Rehbein, Hans Baumeister, and Dietmar Richter: Molecular characterization of a novel rat protein structurally related to poly(A) binding proteins and the 70K protein of the U1 small nuclear ribonucleoprotein particle (snRNP)
Nucl. Acids Res. 1992 20: 1471-1475; doi:10.1093/nar/20.7.1471 [Abstract] [Print PDF] [Request Permissions]

Toshio Tsukiyama and Ohtsura Niwa: Isolation of high affinity cellular targets of the embryonal LTR binding protein, an undifferentiated embryonal carcinoma cell-specific repressor of Moloney leukemia virus
Nucl. Acids Res. 1992 20: 1477-1482; doi:10.1093/nar/20.7.1477 [Abstract] [Print PDF] [Request Permissions]

Mathias Truss, Jörg Bartsch, Georges Chalepakis, and Miguel Beato: Artificial steroid hormone response element generated by dam-methylation
Nucl. Acids Res. 1992 20: 1483-1486; doi:10.1093/nar/20.7.1483 [Abstract] [Print PDF] [Request Permissions]

L.N. Sellner, R.J. Coelen, and J.S. Mackenzie: Reverse transcriptase inhibits Taq polymerase activity
Nucl. Acids Res. 1992 20: 1487-1490; doi:10.1093/nar/20.7.1487 [Abstract] [Print PDF] [Request Permissions]

Artur Scherf and Denise Mattei: Cloning and characterization of chromosome breakpoints of Plasmodium falciparum: breakage and new telomere formation occurs frequently and randomly in subtelomeric genes
Nucl. Acids Res. 1992 20: 1491-1496; doi:10.1093/nar/20.7.1491 [Abstract] [Print PDF] [Request Permissions]

Adam Eyre-Walker: Evidence that both G + C rich and G + C poor isochores are replicated early and late in the cell cycle
Nucl. Acids Res. 1992 20: 1497-1501; doi:10.1093/nar/20.7.1497 [Abstract] [Print PDF] [Request Permissions]

Arnd Annweiler, Urs Müller, and Thomas Wirth: Functional analysis of defined mutations in the immunoglobulin heavy-chain enhancer in transgenic mice
Nucl. Acids Res. 1992 20: 1503-1509; doi:10.1093/nar/20.7.1503 [Abstract] [Print PDF] [Request Permissions]

Isabelle Marty and Yves Meyer: cDNA nucleotide sequence and expression of a tobacco cytoplasmic ribosomal protein L2 gene
Nucl. Acids Res. 1992 20: 1517-1522; doi:10.1093/nar/20.7.1517 [Abstract] [Print PDF] [Request Permissions]

Sergey Beresten, Martina Jahn, and Dieter Söll: Aminoacyl-tRNA synthetase-induced cleavage of tRNA
Nucl. Acids Res. 1992 20: 1523-1530; doi:10.1093/nar/20.7.1523 [Abstract] [Print PDF] [Request Permissions]

Simon T. Whiteside, Kanna V. Visvanathan, and Stephen Goodbourn: Identification of novel factors that bind to the PRD I region of the human ß-interferon promoter
Nucl. Acids Res. 1992 20: 1531-1538; doi:10.1093/nar/20.7.1531 [Abstract] [Print PDF] [Request Permissions]

E. Schärer and R. lggo: Mammalian p53 can function as a transcription factor in yeast
Nucl. Acids Res. 1992 20: 1539-1545; doi:10.1093/nar/20.7.1539 [Abstract] [Print PDF] [Request Permissions]

Joyce M. Sherman, M.John Rogers, and Dieter Söll: Competition of aminoacyl-tRNA synthetases for tRNA ensures the accuracy of aminoacylation
Nucl. Acids Res. 1992 20: 1547-1552; doi:10.1093/nar/20.7.1547 [Abstract] [Print PDF] [Request Permissions]

Heisaburo Shindo, Arata Furubayashi, Mitsuhiro Shimizu, Masaki Miyake, and Fumio Imamoto: Preferential binding of E.coli histone-like protein HU ${alpha}$ to negatively supercoiled DNA
Nucl. Acids Res. 1992 20: 1553-1558; doi:10.1093/nar/20.7.1553 [Abstract] [Print PDF] [Request Permissions]

Catherine D. Prescott and Hans-Christian Kornau: Mutations in E.Coli 16S rRNA that enhance and decrease the activity of a Suppressor tRNA
Nucl. Acids Res. 1992 20: 1567-1571; doi:10.1093/nar/20.7.1567 [Abstract] [Print PDF] [Request Permissions]

Alain Lescure, Sylvie Murgo, Philippe Carbon, and Alain Krol: The proximal promoter and the start site cooperate to specify correct U1 snRNA transcription initiation by RNA polymerase II
Nucl. Acids Res. 1992 20: 1573-1578; doi:10.1093/nar/20.7.1573 [Abstract] [Print PDF] [Request Permissions]

WenQin Xie, Daniel J. O'Mahony, S.David Smith, David Lowe, and Lawrence I. Rothblum: Analysis of the rat ribosomal DNA promoter: characterization of linker-scanning mutants and of the binding of UBF
Nucl. Acids Res. 1992 20: 1587-1592; doi:10.1093/nar/20.7.1587 [Abstract] [Print PDF] [Request Permissions]

Thomas Döring, Barbara Greuer, and Richard Brimacombe: The topography of the 3'-terminal region of Escherichia coli 16S ribosomal RNA; an intra-RNA cross-linking study
Nucl. Acids Res. 1992 20: 1593-1597; doi:10.1093/nar/20.7.1593 [Abstract] [Print PDF] [Request Permissions]

Fried Zwartkruis, Truus Hoeijmakers, Jacqueline Deschamps, and Frits Meijlink: The murine Hox-2.4 promoter contains a functional octamer motif
Nucl. Acids Res. 1992 20: 1599-1606; doi:10.1093/nar/20.7.1599 [Abstract] [Print PDF] [Request Permissions]

Xiubei Liao, David Selinger, Steven Althoff, Anne Chiang, Diana Hamilton, Min Ma, and Jo Ann Wise: Random mutagenesis of Schizosaccharomyces pombe SRP RNA: lethal and conditional lesions cluster in presumptive protein binding sites
Nucl. Acids Res. 1992 20: 1607-1615; doi:10.1093/nar/20.7.1607 [Abstract] [Print PDF] [Request Permissions]

Takashi Ohyama, Masahiko Nagumo, Yoshiko Hirota, and Sadatoshi Sakuma: Alteration of the curved helical structure located in the upstream region of the ß-lactamase promoter of plasmid pUC 19 and its effect on transcription
Nucl. Acids Res. 1992 20: 1617-1622; doi:10.1093/nar/20.7.1617 [Abstract] [Print PDF] [Request Permissions]

Kin-Chow Chang, Ekkehard Hansen, Thomas Jaenicke, Geoffrey Goldspink, and Peter Butterworth: Transformation of a novel direct-repeat repressor element into a promoter and enhancer by multimerisation
Nucl. Acids Res. 1992 20: 1669-1674; doi:10.1093/nar/20.7.1669 [Abstract] [Print PDF] [Request Permissions]

Uwe Maskos and Edwin M. Southern: Oligonucleotide hybridisations on glass supports: a novel linker for oligonucleotide synthesis and hybridisation properties of oligonucleotides synthesised in situ
Nucl. Acids Res. 1992 20: 1679-1684; doi:10.1093/nar/20.7.1679 [Abstract] [Print PDF] [Request Permissions]

G. Terrance Walker, Melinda S. Fraiser, James L. Schram, Michael C. Little, James G. Nadeau, and Douglas P. Malinowski: Strand displacement amplification—an isothermal, in vitro DNA amplification technique
Nucl. Acids Res. 1992 20: 1691-1696; doi:10.1093/nar/20.7.1691 [Abstract] [Print PDF] [Request Permissions]

Kristi K. Myers, William A. Fonzi, and Paul S. Sypherd: Isolation and sequence analysis of the gene for translation elongation factor 3 from Candida albicans
Nucl. Acids Res. 1992 20: 1705-1710; doi:10.1093/nar/20.7.1705 [Abstract] [Print PDF] [Request Permissions]

M. Keller, L. H. Tessier, R. L. Chan, J. H. Weil, and P. lmbault: In Euglena, spliced-leader RNA (SL-RNA) and 5S rRNA genes are tandemly repeated
Nucl. Acids Res. 1992 20: 1711-1715; doi:10.1093/nar/20.7.1711 [Abstract] [Print PDF] [Request Permissions]

Quin Chou, Marion Russell, David E. Birch, Jonathan Raymond, and Will Bloch: Prevention of pre-PCR mis-priming and primer dimerization improves low-copy-number amplifications
Nucl. Acids Res. 1992 20: 1717-1723; doi:10.1093/nar/20.7.1717 [Abstract] [Print PDF] [Request Permissions]

Roger D. Bies, Stephanie F. Phelps, M.Dolores Cortez, Robert Roberts, C.Thomas Caskey, and Jeffrey S. Chamberlain: Human and murine dystrophin mRNA transcripts are differentially expressed during skeletal muscle, heart, and brain development
Nucl. Acids Res. 1992 20: 1725-1731; doi:10.1093/nar/20.7.1725 [Abstract] [Print PDF] [Request Permissions]

Yoichi Honda, Toshiaki Nakamura, Kastunori Tanaka, Akihisa Higashi, Hiroshi Sakai, Tohru Komano, and Michael Bagdasarian: DnaG-dependent priming signals can substitute for the two essential DNA initiation signals in oriV of the broad host-range plasmid RSF1010
Nucl. Acids Res. 1992 20: 1733-1737; doi:10.1093/nar/20.7.1733 [Abstract] [Print PDF] [Request Permissions]

Evgeny V. Pilipenko, Svetlana V. Maslova, Alexander N. Sinyakov, and Vadim I. Agol: Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: a proposal for the existence of tRNA-like terminal structures
Nucl. Acids Res. 1992 20: 1739-1745; doi:10.1093/nar/20.7.1739 [Abstract] [Print PDF] [Request Permissions]

Sharda K. Hebbar, Scott M. Belcher, and Philip S. Perlman: A maturase-encoding group MA intron of yeast mitochondria self-splices in vitro
Nucl. Acids Res. 1992 20: 1747-1754; doi:10.1093/nar/20.7.1747 [Abstract] [Print PDF] [Request Permissions]

Andreas Holtel, Kenneth N. Timmis, and Juan L. Ramos: Upstream binding sequences of the XyIR activator protein and integration host factor in the xylS gene promoter region of the Pseudomonas TOL plasmid
Nucl. Acids Res. 1992 20: 1755-1762; doi:10.1093/nar/20.7.1755 [Abstract] [Print PDF] [Request Permissions]

Hansjuerg Alder, Mitsuo Yoshinouchi, Michael B. Prystowsky, Pierette Appasamy, and Renato Baserga: A conserved region in intron 1 negatively regulates the expression of the PCNA gene
Nucl. Acids Res. 1992 20: 1769-1775; doi:10.1093/nar/20.7.1769 [Abstract] [Print PDF] [Request Permissions]

Scott W. BIume, Jay E. Gee, Kedar Shrestha, and Donald M. Miller: Triple helix formation by purine-rich oligonucleotides targeted to the human dihydrofolate reductase promoter
Nucl. Acids Res. 1992 20: 1777-1784; doi:10.1093/nar/20.7.1777 [Abstract] [Print PDF] [Request Permissions]

Annabeth Fieck, Denise L. Wyborski, and Jay M. Short: Modifications of the E.coli Lac repressor for expression in eukaryotic cells: effects of nuclear signal sequences on protein activity and nuclear accumulation
Nucl. Acids Res. 1992 20: 1785-1791; doi:10.1093/nar/20.7.1785 [Abstract] [Print PDF] [Request Permissions]

Noriko Shimizu, Gwen Prior, Patrick K. Umeda, and Radovan Zak: Cis-acting elements responsible for muscle-specific expression of the myosin heavy chain ß gene
Nucl. Acids Res. 1992 20: 1793-1799; doi:10.1093/nar/20.7.1793 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

Reiko Iwase, Masayuki Maeda, Toshiki Fujiwara, Mitsuo Sekine, Tsujiaki Hata, and Kin-ichiro Miura: Molecular design of a eukaryotic messenger RNA and its chemical synthesis
Nucl. Acids Res. 1992 20: 1643-1648; doi:10.1093/nar/20.7.1643 [Abstract] [Print PDF] [Request Permissions]

David S. Peabody and Kathryn R. Ely: Control of translational repression by protein - protein interactions
Nucl. Acids Res. 1992 20: 1649-1655; doi:10.1093/nar/20.7.1649 [Abstract] [Print PDF] [Request Permissions]

Rainer Merkl, Manfred Kröger, Peter Rice, and Hans-Joachim Fritz: Statistical evaluation and biological interpretation of non-random abundance in the E.coli K-12 genome of tetra-and pentanucleotide sequences related to VSP DNA mismatch repair
Nucl. Acids Res. 1992 20: 1657-1662; doi:10.1093/nar/20.7.1657 [Abstract] [Print PDF] [Request Permissions]

Uwe Maskos and Edwin M. Southern: Parallel analysis of oligodeoxyribonucleotide (oligonucleotide) interactions. I. Analysis of factors influencing oligonucleotide duplex formation
Nucl. Acids Res. 1992 20: 1675-1678; doi:10.1093/nar/20.7.1675 [Abstract] [Print PDF] [Request Permissions]

Ryszard Kierzek, Liyan He, and Douglas H. Turner: Association of 2' - 5' oligoribonucleotides
Nucl. Acids Res. 1992 20: 1685-1690; doi:10.1093/nar/20.7.1685 [Abstract] [Print PDF] [Request Permissions]

Andrew Johnson, Yun Qu, Bennett Van Houten, and Nicholas Farrell: B ${uparrow}$ Z DNA conformational changes induced by a family of dinuclear bis(platinum) complexes
Nucl. Acids Res. 1992 20: 1697-1703; doi:10.1093/nar/20.7.1697 [Abstract] [Print PDF] [Request Permissions]

Frank C. Richardson, Katherine K. Richardson, Julian S. Kroin, and Larry W. Hertel: Synthesis and restriction enzyme analysis of oligodeoxyribonucleotides containing the anti-cancer drug 2', 2'-difluoro-2'-deoxycytidine
Nucl. Acids Res. 1992 20: 1763-1768; doi:10.1093/nar/20.7.1763 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Sandro Banfi, Susan A. Ledbetter, A.Craig Chinault, and Huda Y. Zoghbi: An easy and rapid method for the detection of chimeric yeast artificial chromosome clones
Nucl. Acids Res. 1992 20: 1814; doi:10.1093/nar/20.7.1814 [Print PDF] [Request Permissions]

Susan E. Rutberg and Zeev Ronai: A simple and efficient method for the purification of specific DNA binding proteins
Nucl. Acids Res. 1992 20: 1815; doi:10.1093/nar/20.7.1815 [Print PDF] [Request Permissions]

Corrigendum:

X.-Y. Li, R. Mantovani, R. Hooft van Huijsduijnen, L. Andre, C. Benoist, and D. Mathis: Evolutionary variation of the CCAAT-binding transcription factor NF-Y
Nucl. Acids Res. 1992 20: 1841; doi:10.1093/nar/20.7.1841 [Print PDF] [Request Permissions]

Errata:

Peter M. Brett, Georg Melmer, and Hugh M. D. Gurling: Erratum: A microsatellite polymorphism at D3S11 locus
Nucl. Acids Res. 1992 20: 1841; doi:10.1093/nar/20.7.1841-a [Print PDF] [Request Permissions]

Eric Henderson: Erratum: Imaging and nanodissection of individual supercoiled plasmids by atomic force microscopy
Nucl. Acids Res. 1992 20: 1841; doi:10.1093/nar/20.7.1841-b [Print PDF] [Request Permissions]

Author index:

: Author index
Nucl. Acids Res. 1992 20: 1839-1840; doi:10.1093/nar/20.7.1839 [Print PDF] [Request Permissions]

ENZYMOLOGY:

Ashok K. Dubey, Beat Mollet, and Richard J. Roberts: Purification and characterization of the Mspl DNA methyltransferase cloned and overexpressed in E.coli
Nucl. Acids Res. 1992 20: 1579-1585; doi:10.1093/nar/20.7.1579 [Abstract] [Print PDF] [Request Permissions]

Yanping Zhang, Michael Nelson, and James L. Van Etten: A single amino acid change restores DNA Cytosine methyltransferase activity in a cloned chlorella virus pseudogene
Nucl. Acids Res. 1992 20: 1637-1642; doi:10.1093/nar/20.7.1637 [Abstract] [Print PDF] [Request Permissions]

GENOME STRUCTURE AND MAPPING:

H.Leighton Grimes, Brian E. Szente, and Maureen M. Goodenow: C-ski cDNAs are encoded by eight exons, six of which are closely linked within the chicken genome
Nucl. Acids Res. 1992 20: 1511-1516; doi:10.1093/nar/20.7.1511 [Abstract] [Print PDF] [Request Permissions]

Fengchun Ye, Frédéric Laigret, Jane C. Whitley, Christine Citti, Lloyd R. Finch, Patricia Carle, Joël Renaudin, and Joseph-Marie Bové: A physical and genetic map of the Spiroplasma citri genome
Nucl. Acids Res. 1992 20: 1559-1565; doi:10.1093/nar/20.7.1559 [Abstract] [Print PDF] [Request Permissions]

Yves de Chastonay, Heinz Felder, Christopher Link, Pierre Aeby, Heinz Tobler, and Fritz Müller: Unusual features of the retroid element PAT from the nematode Panagrellus redivivus
Nucl. Acids Res. 1992 20: 1623-1628; doi:10.1093/nar/20.7.1623 [Abstract] [Print PDF] [Request Permissions]

Katherine Tynan, Anne Olsen, Barbara Trask, Pieter de Jong, John Thompson, Wolfgang Zimmermann, Anthony Carrano, and Harvey Mohrenweiser: Assembly and analysis of cosmid contigs in the CEA-gene family region of human chromosome 19
Nucl. Acids Res. 1992 20: 1629-1636; doi:10.1093/nar/20.7.1629 [Abstract] [Print PDF] [Request Permissions]

Ashok S. Bhagwat and Michael McClelland: DNA mismatch correction by Very Short Patch repair may have altered the abundance of oligonucleotides in the E. coli genome
Nucl. Acids Res. 1992 20: 1663-1668; doi:10.1093/nar/20.7.1663 [Abstract] [Print PDF] [Request Permissions]

FOR THE RECORD SEQUENCE:

K. Fleischhauer, J.H. Park, J.P. DiSanto, M. Marks, K. Ozato, and S.Y. Yang: Isolation of a full-length cDNA clone encoding a N-terminally variant form of the human retinoid X receptor ß
Nucl. Acids Res. 1992 20: 1801; doi:10.1093/nar/20.7.1801 [Print PDF] [Request Permissions]

Mika Tirronen and Christophe Roos: The kurz locus of Drosophila melanogaster shares conserved motifs with a family of yeast ATP dependent splicing factors
Nucl. Acids Res. 1992 20: 1802; doi:10.1093/nar/20.7.1802 [Print PDF] [Request Permissions]

Nadezhda N. Matvienko, Vladimir M. Kramarov, Leonid Yu. lvanov, and Nicholas I. Matvienko: Bce831, a restriction endonuclease from Bacillus cereus 83 which recognizes novel nonpalinclromic sequence 5'-CTTGAG-3' and is stimulated by S-adenosylmethionine
Nucl. Acids Res. 1992 20: 1803; doi:10.1093/nar/20.7.1803 [Print PDF] [Request Permissions]

Reuven Agami and Michal Shapira: Nucleotide sequence of the spliced leader RNA gene from Leishmania mexicana amazonensis
Nucl. Acids Res. 1992 20: 1804; doi:10.1093/nar/20.7.1804 [Print PDF] [Request Permissions]

Huey-Jen Tsay, Yoon-Hyuk Choe, Craig M. Neville, and Jakob Schmidt: CTF4, a chicken transcription factor of the helix-loop-helix class A family
Nucl. Acids Res. 1992 20: 1805; doi:10.1093/nar/20.7.1805 [Print PDF] [Request Permissions]

M. Rina, M. Tzanodaskalaki, A. Karagouni, M. Pagomenou, and V. Bouriotis: Isolation and identification of restriction endonuclease MspCI
Nucl. Acids Res. 1992 20: 1806; doi:10.1093/nar/20.7.1806 [Print PDF] [Request Permissions]

M. Rina, D. Dialektakis, D. Clark, M. Pagomenou, and V. Bouriotis: Isolation and identification of restriction endonuclease BseCI
Nucl. Acids Res. 1992 20: 1807; doi:10.1093/nar/20.7.1807 [Print PDF] [Request Permissions]

M. Rina, M. Tzanodaskalaki, A. Karagouni, M. Pagomenou, and V. Bouriotis: Isolation and identification of restriction endonuclease SseBI
Nucl. Acids Res. 1992 20: 1808; doi:10.1093/nar/20.7.1808 [Print PDF] [Request Permissions]

Michel Hernould, Armand Mouras, Simon Litvak, and Alejandro Araya: RNA editing of the mitochondrial atp9 transcript from tobacco
Nucl. Acids Res. 1992 20: 1809; doi:10.1093/nar/20.7.1809 [Print PDF] [Request Permissions]

J.-C Albercht and B. Fleckenstein: Nucleotide sequence of HSUR 6 and HSUR 7, two small RNAs of herpesvirus saimiri
Nucl. Acids Res. 1992 20: 1810; doi:10.1093/nar/20.7.1810 [Print PDF] [Request Permissions]

Patrick Forterre: The DNA polymerase from the archaebacterium Pyrococcus furiosus does not testify for a specific relationship between archaebacteria and eukaryotes
Nucl. Acids Res. 1992 20: 1811; doi:10.1093/nar/20.7.1811 [Print PDF] [Request Permissions]

Leonard I. Zon and Stuart H. Orkin: Sequence of the human GATA-1 promoter
Nucl. Acids Res. 1992 20: 1812; doi:10.1093/nar/20.7.1812 [Print PDF] [Request Permissions]

Julie A. Mustard, Andrew T. Thliveris, and David W. Mount: Sequence of the Salmonella typhimurium LT2 lexA gene and its regulatory region
Nucl. Acids Res. 1992 20: 1813; doi:10.1093/nar/20.7.1813 [Print PDF] [Request Permissions]

NUCLEOTIDE SEQUENCE UPDATE:

: New nucleotide sequence data on the EMBL File Server
Nucl. Acids Res. 1992 20: 1817-1837; doi:10.1093/nar/20.7.1817 [Print PDF] [Request Permissions]

Nucleic Acids Research