Nucleic Acids Research

COMPUTATIONAL BIOLOGY:

Emmanuel Spanakis

Problems related to the interpretation of autoradiographic data on gene expression using common constitutive transcripts as controls
Nucl. Acids Res. 1993 21: 3809-3819; doi:10.1093/nar/21.16.3809 [Abstract] [Print PDF] [Request Permissions]  

Owen White, Ted Dunning, Granger Sutton, Mark Adams, J. Craig Venter, and Chris Fields

A quality control algorithm for DNA sequencing projects
Nucl. Acids Res. 1993 21: 3829-3838; doi:10.1093/nar/21.16.3829 [Abstract] [Print PDF] [Request Permissions]  

Lon R. Cardon, Chris Burge, Gabriel A. Schachtel, B. Edwin Blaisdell, and Samuel Karlin

Comparative DNA sequence features in two long Escherichia coli contigs
Nucl. Acids Res. 1993 21: 3875-3884; doi:10.1093/nar/21.16.3875 [Abstract] [Print PDF] [Request Permissions]  

MOLECULAR BIOLOGY:

Alexandra Zobel, Gabriele Neumann, and Gerd Hobom

RNA polymerase I catalysed transcription of insert viral cDNA
Nucl. Acids Res. 1993 21: 3607-3614; doi:10.1093/nar/21.16.3607 [Abstract] [Print PDF] [Request Permissions]  

Alexandra Reymond and Viesturs Simanis

Domains of p85^cdc10 required for function of the fission yeast DSC-1 factor
Nucl. Acids Res. 1993 21: 3615-3621; doi:10.1093/nar/21.16.3615 [Abstract] [Print PDF] [Request Permissions]  

JohnH. White, Brian J. Kilbey, Erik de Vries, Michael Goman, Pietro Alano, Sandie Chessman, Sybil McAleese, and Robert G. Ridley

The gene encoding DNA polymerase from Plasmodium falciparum
Nucl. Acids Res. 1993 21: 3643-3646; doi:10.1093/nar/21.16.3643 [Abstract] [Print PDF] [Request Permissions]  

Ján Kormanec and Marian Farka{caron}ovsky

Differential expression of principal sigma factor homologues of Streptomyces aureofaciens correlates with the developmental stage
Nucl. Acids Res. 1993 21: 3647-3652; doi:10.1093/nar/21.16.3647 [Abstract] [Print PDF] [Request Permissions]  

Manuel Espinosa- Urgel and Antonio Tormo

^s-dependent promoters in Escherichia coli are located in DNA regions with intrinsic curvature
Nucl. Acids Res. 1993 21: 3667-3670; doi:10.1093/nar/21.16.3667 [Abstract] [Print PDF] [Request Permissions]  

Endre Kiss-Toth, Saowakon Paca-uccaralertkun, Ildiko Unk, and Imre Boros

Member of the CREB/ATF protein family, but not CREB plays an active role in BLV tax trans activation in vivo
Nucl. Acids Res. 1993 21: 3677-3682; doi:10.1093/nar/21.16.3677 [Abstract] [Print PDF] [Request Permissions]  

M. Schapira, C. Desdouets, C. Jacq, and J. Perea

I-Sce III an intron-encoded DNA endonuclease from yeast mitochondria. Asymmetrical DNA binding properties and cleavage reaction
Nucl. Acids Res. 1993 21: 3683-3689; doi:10.1093/nar/21.16.3683 [Abstract] [Print PDF] [Request Permissions]  

David Zarkower and Jonathan Hodgkin

Zinc fingers in sex determination: only one of the two C.elegans Tra-1 proteins binds DNA in Vitro
Nucl. Acids Res. 1993 21: 3691-3698; doi:10.1093/nar/21.16.3691 [Abstract] [Print PDF] [Request Permissions]  

R. Hooft van Huihsduijnen, R. Pescini, and J.F. DeLamarter

Two distinct NF-B complexes differing in their larger subunit bind the E-selectin promoter B element
Nucl. Acids Res. 1993 21: 3711-3717; doi:10.1093/nar/21.16.3711 [Abstract] [Print PDF] [Request Permissions]  

Sally L. Davies, John R. Jenkins, and Lan D. Hickson

Human cells express two differentially spliced forms of topoisomerase IIß mRNA
Nucl. Acids Res. 1993 21: 3719-3723; doi:10.1093/nar/21.16.3719 [Abstract] [Print PDF] [Request Permissions]  

Javier Caldentey, Luis Blanco, Dennis H. Bamford, and Margarita Salas

In Vitro replication of bacteriophage PRD1 DNA. Characterization of the protein-primed initiation site
Nucl. Acids Res. 1993 21: 3725-3730; doi:10.1093/nar/21.16.3725 [Abstract] [Print PDF] [Request Permissions]  

Naoyuki Minra and Kiyoji Tanaka

Analysis of the rat hepatocyte nuclear factor (HNF) 1 gene promoter: synergistic activation by HNF4 and HNF1 proteins
Nucl. Acids Res. 1993 21: 3731-3736; doi:10.1093/nar/21.16.3731 [Abstract] [Print PDF] [Request Permissions]  

Yoshinao Azuma, Masahiro Yamagishi, and Akira Ishihama

Subunits of the Schizosaccharomyces pombe RNA polymerase II: Enzyme purification and structure of the subunit 3 gene
Nucl. Acids Res. 1993 21: 3749-3754; doi:10.1093/nar/21.16.3749 [Abstract] [Print PDF] [Request Permissions]  

petra M. Baumgart, Hans-Christian Kliem, Jutta Gottfried-Anacker, manfred Wiessler, and Heinz H. Schmeiser

Site-specific mutagenesis induced by single O⁶-alkylguanines (O⁶-n-propyl, O⁶-n-butyl, O⁶-n-octyl) in vivo
Nucl. Acids Res. 1993 21: 3755-3760; doi:10.1093/nar/21.16.3755 [Abstract] [Print PDF] [Request Permissions]  

Michitaka Numoto, Ohtsura Niwa, Jonthan Kaplan, Kwok-Kin Wrong, Kevin Merrell, Kenji Kamiya, Kazuyoshi Yanagihara, and Kathryn Calame

Transcriptional repressor ZF5 identifies a new conserved domain in zina finger proteins
Nucl. Acids Res. 1993 21: 3767-3775; doi:10.1093/nar/21.16.3767 [Abstract] [Print PDF] [Request Permissions]  

Rosemary A. Dorrington and Terrance G. Cooper

The DAL82 protein of Saccharomyces cerevisiae binds to the DAL upstream induction sequence (UIS)
Nucl. Acids Res. 1993 21: 3777-3784; doi:10.1093/nar/21.16.3777 [Abstract] [Print PDF] [Request Permissions]  

Sophia S.Y. Su and Aaron P. Mitchell

Molecular characterization of the yeast meiotic regulatory gene RIM1
Nucl. Acids Res. 1993 21: 3789-3797; doi:10.1093/nar/21.16.3789 [Abstract] [Print PDF] [Request Permissions]  

Satoshi Orita, Hironao Kobayashi, Yuko Aono, Akihiko Saiga, Miki Maeda, and Hisanaga Igarashi

p21X mRNA is expressed as a singly spliced pX transcript from defective provirus genomes having a partial delection of the pol-env region in human T-cell leukemia virus type 1-infected cells
Nucl. Acids Res. 1993 21: 3799-3807; doi:10.1093/nar/21.16.3799 [Abstract] [Print PDF] [Request Permissions]  

Tracey L. Fisher, Terry Terhorst, Xiaodong Cao, and Richard W. Wagner

Intracellular disposition and metabolism of fluorescently-labled unmodified and modified oligouncleotides microijjected into mammalian cells
Nucl. Acids Res. 1993 21: 3857-3865; doi:10.1093/nar/21.16.3857 [Abstract] [Print PDF] [Request Permissions]  

Girish N. Nallur, Haren A. Vasavada, Patanjali R. Sankhavaram, Wei-Jun Xu, and Sherman M. Weissman

Evaluation of the contingent replication assay (CRA) and its application to the study of the general transcription initiation factor, TFIIF
Nucl. Acids Res. 1993 21: 3867-3873; doi:10.1093/nar/21.16.3867 [Abstract] [Print PDF] [Request Permissions]  

Paul C. Brown, Snorri S. Thorgeirsson, and Jeffrey A. Silverman

Cloning and regulation of the rat mdr2 gene
Nucl. Acids Res. 1993 21: 3885-3891; doi:10.1093/nar/21.16.3885 [Abstract] [Print PDF] [Request Permissions]  

CHEMISTRY:

Madhu S. Puvvada, John A. Hartley, Terence C. Jenkins, and David E. Thurston

A quantitative assay to measure the relative DNA-binding affinity of pyrrolo[2,1-c][1,4]benzodiazepine (PBD) antitumour antibiotics based on the inhibition of restriction endonuclease BamhI
Nucl. Acids Res. 1993 21: 3671-3675; doi:10.1093/nar/21.16.3671 [Abstract] [Print PDF] [Request Permissions]  

Peter V. Riccelli and Albert S. Benight

Tetramethylammonium does not universally neutralize sequence dependent DNA stability
Nucl. Acids Res. 1993 21: 3785-3788; doi:10.1093/nar/21.16.3785 [Abstract] [Print PDF] [Request Permissions]  

METHODS:

Stephan Rust, Harald Funke, and Gerd Assmann

Mutagenically separated PCR (MS-PCR): a highly specific one step procedure for easy mutation detection
Nucl. Acids Res. 1993 21: 3623-3629; doi:10.1093/nar/21.16.3623 [Abstract] [Print PDF] [Request Permissions]  

Tadashi Hongyo, Gregory S. Buzard, Richard J. Calvert, and Christopher M. Weghorst

‘Cold SSCP’: a simple, rapid and non-radioactive method for optimized single-strand conformation polymorphism analyses
Nucl. Acids Res. 1993 21: 3637-3642; doi:10.1093/nar/21.16.3637 [Abstract] [Print PDF] [Request Permissions]  

Pascale Bertrand, Eric Corteggiani, Marie Dutreix, Jacques Coppey, and Bernard S. Lopez

Homologous pairing between single-stranded DNA immobilized on a nitrocellulose membrane and duplex DNA is specific for RecA activity in bacterial crude extract
Nucl. Acids Res. 1993 21: 3653-3657; doi:10.1093/nar/21.16.3653 [Abstract] [Print PDF] [Request Permissions]  

M.J. Graham, S.M. Freier, R.M. Crooke, D.J. Ecker, R.N. maslova, and E.a. Lesnik

Tritium labeling of antisense oligonucleotides by exchange with tritiated water
Nucl. Acids Res. 1993 21: 3737-3743; doi:10.1093/nar/21.16.3737 [Abstract] [Print PDF] [Request Permissions]  

X-M. Li and L.J. Shapiro

Three-step PCR mutagenesis for 'linker scanning'
Nucl. Acids Res. 1993 21: 3745-3748; doi:10.1093/nar/21.16.3745 [Abstract] [Print PDF] [Request Permissions]  

Linda G. Lee, Charles R. Connell, and Will Bloch

Allelic discrimination by nick-translation PCR with fluorgenic probes
Nucl. Acids Res. 1993 21: 3761-3766; doi:10.1093/nar/21.16.3761 [Abstract] [Print PDF] [Request Permissions]  

Jose Ignacio Ibeas and Juan Jimenez

Electrophoretic Karyotype of budding yeasts with intact cell Wall
Nucl. Acids Res. 1993 21: 3902; doi:10.1093/nar/21.16.3902 [Print PDF] [Request Permissions]  

Edward J. Gunther, Noreen E. Murray, and Peter M. Glazer

High efficiency, restriction-deficient in vitro packaging extracts for bacteriophage lambda DNA using a new E.coli lysogen
Nucl. Acids Res. 1993 21: 3903-3904; doi:10.1093/nar/21.16.3903 [Print PDF] [Request Permissions]  

Brian Holloway, Dean D. Erdman, Edison L. Durigon, and James J. Murtagh, Jr

An exonuclease-amplification coupled capture technique improves detection of PCR product
Nucl. Acids Res. 1993 21: 3905-3606; doi:10.1093/nar/21.16.3905 [Print PDF] [Request Permissions]  

S.M. Testa and P.T. Gilham

Analysis of oligonucleotide structure using hyperchromism measurements at long wavelengths
Nucl. Acids Res. 1993 21: 3907-3608; doi:10.1093/nar/21.16.3907 [Print PDF] [Request Permissions]  

Qiu-Qiong Cai and Isabelle Touitou

Excess PCR primers may dramatically affect SSCP efficiency
Nucl. Acids Res. 1993 21: 3909-3910; doi:10.1093/nar/21.16.3909 [Print PDF] [Request Permissions]  

Luchezar Karagyozov, Iveta D. Kalcheva, and Verne M. Chapman

Construction of random small-insert genomic libraries highly enriched for simple sequence repeats
Nucl. Acids Res. 1993 21: 3911-3912; doi:10.1093/nar/21.16.3911 [Print PDF] [Request Permissions]  

Matthias Höss and Svante Pääbo

DNA extraction from Pleistocene bones by a silica-based purification method
Nucl. Acids Res. 1993 21: 3913-3914; doi:10.1093/nar/21.16.3913 [Print PDF] [Request Permissions]  

Mark G. Thomas, Sarah A. Hesse, Andrew T. McKie, and Farzin Farzaneh

Sequencing of cDNA using anchored oligo dT primers
Nucl. Acids Res. 1993 21: 3915-3916; doi:10.1093/nar/21.16.3915 [Print PDF] [Request Permissions]  

Udaykumar, Jay S. Epstein, and Indira K. Hewlett

A novel method employing UNG to avoid carry-over contamination in RNA-PCR
Nucl. Acids Res. 1993 21: 3917-3918; doi:10.1093/nar/21.16.3917 [Print PDF] [Request Permissions]  

Corrigenda:

P. Arcari, M. Gallo, G. Ianniciello, A. Dello Russo, and V. Bocchini

Primary structure of the elongation factor l in Sulfolobus solfataricus
Nucl. Acids Res. 1993 21: 3920; doi:10.1093/nar/21.16.3920 [Abstract] [Print PDF] [Request Permissions]  

R.M. Knobler, F.B. Radlwimmer, and MJ. Lane

Gilvocarcin V exhibits both equilibrium DNA binding and UV light induced DNA adduct formation which is sequence context dependent
Nucl. Acids Res. 1993 21: 3920; doi:10.1093/nar/21.16.3920-a [Abstract] [Print PDF] [Request Permissions]  

Author index:

Author index
Nucl. Acids Res. 1993 21: 3919; doi:10.1093/nar/21.16.3919 [Print PDF] [Request Permissions]  

ENZYMOLOGY:

Anthi Georgaki and Ulrich Hübscher

DNA unwinding by replication protein A is a property of the 70 kDa subunit and is facilitated by phosphorylation of the 32 kDa subunit
Nucl. Acids Res. 1993 21: 3659-3665; doi:10.1093/nar/21.16.3659 [Abstract] [Print PDF] [Request Permissions]  

Stefania Francesconi, Hyunsun Park, and Teresa S.-F. Wang

Fission yeast with DNA polymerase temperature-sensitive alleles exhibits cell division cycle phenotype
Nucl. Acids Res. 1993 21: 3821-3828; doi:10.1093/nar/21.16.3821 [Abstract] [Print PDF] [Request Permissions]  

Wndy e. Raymond and Nancy Kleckner

RAD50 protein of S.cerevisiae exhibits ATP-dependent DNA binding
Nucl. Acids Res. 1993 21: 3851-3856; doi:10.1093/nar/21.16.3851 [Abstract] [Print PDF] [Request Permissions]  

GENOME STRUCTURE AND MAPPING:

Jens Nederby Nielsen, Charlotte Hallenberg, Sune Frederiksen, Pernille Dissing Sørensen, and Bodil Lomholt

Transcription of human 5S rRNA genes is influenced by an upstream DNA sequence
Nucl. Acids Res. 1993 21: 3631-3636; doi:10.1093/nar/21.16.3631 [Abstract] [Print PDF] [Request Permissions]  

Stéphanie Brand and Henri-Marc Bourbon

The developmentally-regulated Drosophila gene rox8 encodes an RRM-type RNA binding protein structurally related to human TIA-1-type nucleolysins
Nucl. Acids Res. 1993 21: 3699-3704; doi:10.1093/nar/21.16.3699 [Abstract] [Print PDF] [Request Permissions]  

SEQUENCE:

Jan Michiels, Petra De Wilde, and Jos Vanderleyden

Sequence of the Rhizobium leguminosarum biovar phaseoli syrM gene
Nucl. Acids Res. 1993 21: 3893; doi:10.1093/nar/21.16.3893 [Print PDF] [Request Permissions]  

Kyungmin Hahm, Gregg Kim, Christoph W. Turck, and Stephen T. Smale

Isolation of a murine gene encoding a nucleic acid-binding protein with homology to hnRNP K
Nucl. Acids Res. 1993 21: 3894; doi:10.1093/nar/21.16.3894 [Print PDF] [Request Permissions]  

Xiaolong Zhu, Murray Wittner, Herbet B. Tanowitz, Ann Cali, and Louis M. Weiss

Nucleotide sequence of the small subunit rRNA of Ameson michaelis
Nucl. Acids Res. 1993 21: 3895; doi:10.1093/nar/21.16.3895 [Print PDF] [Request Permissions]  

Toru Inoue, Shigeo Yamaguchi, Toru Kanno, Shigeo Sugita, and Takakiyo Saeki

The complete nucleotide sequence of a pathogenic swine vesicular disease virus isolated in Japan (J1'73) and phylogenetic analysis
Nucl. Acids Res. 1993 21: 3896; doi:10.1093/nar/21.16.3896 [Print PDF] [Request Permissions]  

Stefan Baumgartner, Doris Martin, and Ruth Chiquet-Ehrismann

Drosophila ribosomal protein S19 cDNA sequence
Nucl. Acids Res. 1993 21: 3897; doi:10.1093/nar/21.16.3897 [Print PDF] [Request Permissions]  

Mark A. Ragan, Carolyn J. Bird, Ellen L. Rice, and Rama K. Singh

The nuclear 18S ribosomal RNA gene of the red alga Hildenbrandia rubra contains a Group I intron
Nucl. Acids Res. 1993 21: 3898; doi:10.1093/nar/21.16.3898 [Print PDF] [Request Permissions]  

Takashi Ueno, Hiroyuki Ito, Hirokazu Kotani, Fusao Kimizuka, and Kazuo Nakajima

Cloning and expression of the NspV restriction-modification genes of Nostoc sp. strain PCC7524
Nucl. Acids Res. 1993 21: 3899; doi:10.1093/nar/21.16.3899 [Print PDF] [Request Permissions]  

Carlo Presutti, Tommaso Villa, and Irene Bozzoni

The primary sequence of the Schizosaccharomyces pombe protein homologous toS.cerevisiae ribosomal protein L2
Nucl. Acids Res. 1993 21: 3900; doi:10.1093/nar/21.16.3900 [Print PDF] [Request Permissions]  

O. Billaut-Mulot, V. Pommier, R. Schöneck, B. Plumas-marty, A. Taibi, M. Loyens, A. Capron, and M.A. Ouaissi

Nucleotide sequence of a Trypanosoma cruzi cDNA encoding a protein homologous to mammalian EF1
Nucl. Acids Res. 1993 21: 3901; doi:10.1093/nar/21.16.3901 [Print PDF] [Request Permissions]  

STRUCTURAL BIOLOGY:

Christian Bailly, Pierre Colson, Jean-Pierre Hénichart, and Claude Houssier

The different binding modes of Hoechst 33258 to DNA studied by electirc linear dichroism
Nucl. Acids Res. 1993 21: 3705-3709; doi:10.1093/nar/21.16.3705 [Abstract] [Print PDF] [Request Permissions]  

T.N. Jaishree and Andrew H.-J Wang

NMR studies of pH-dependent conformational polymorphism of alternating (C-T)n sequences
Nucl. Acids Res. 1993 21: 3839-3844; doi:10.1093/nar/21.16.3839 [Abstract] [Print PDF] [Request Permissions]  

Martin J. Serra, Matthew H. Lyttle, Theresa J. Axenson, Calvin A. Schadt, and Douglas H. Turner

RNA hairpin loop stability depends on closing base pair
Nucl. Acids Res. 1993 21: 3845-3849; doi:10.1093/nar/21.16.3845 [Abstract] [Print PDF] [Request Permissions]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.