Nucl. Acids Res. -- Table of Contents (21 [4, February 25 1993])

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Contents: Volume 21, Number 4    25 February 1993    [Index by Author]

       SURVEY AND SUMMARY

       MOLECULAR BIOLOGY

       CHEMISTRY

       METHODS

       Errata

       Author index

       ENZYMOLOGY

       SEQUENCE

Other Issues:

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SURVEY AND SUMMARY:

Dan K. Braithwaite and Junetsu Ito: Compilation, alignment, and phylogenetic relationships of DNA polymerases
Nucl. Acids Res. 1993 21: 787-802; doi:10.1093/nar/21.4.787 [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

Maria-Trinidad Gallegos, Carmen Michán, and Juan L. Ramos: The XylS/AraC family of regulators
Nucl. Acids Res. 1993 21: 807-810; doi:10.1093/nar/21.4.807 [Abstract] [Print PDF] [Request Permissions]

Sohail A. Qureshi and Howard T. Jacobs: Characterization of a high-affinity binding site for a DNA-binding protein from sea urchin embryo mitochondria
Nucl. Acids Res. 1993 21: 811-816; doi:10.1093/nar/21.4.811 [Abstract] [Print PDF] [Request Permissions]

H. De Rocquigny, D. Ficheux, C. Gabus, B. Allain, M. C. Fournie-Zaluski, J.-L. Darlix, and B. P. Roques: Two short basic sequences surrounding the zinc finger of nucleocapsid protein NCp10 of Moloney murine leukemia virus are critical for RNA annealing activity
Nucl. Acids Res. 1993 21: 823-829; doi:10.1093/nar/21.4.823 [Abstract] [Print PDF] [Request Permissions]

Mary Lapadat-Tapolsky, Hugues De Rocquigny, Dik Van Gent, Bernard Roques, Ronald Plasterk, and Jean-Luc Darlix: Interactions between HIV-1 nucleocapsid protein and viral DNA may have important functions in the viral life cycle
Nucl. Acids Res. 1993 21: 831-839; doi:10.1093/nar/21.4.831 [Abstract] [Print PDF] [Request Permissions]

Tore Samuelsson and Monica Olsson: GTPase activity of a bacterial SRP-like complex
Nucl. Acids Res. 1993 21: 847-853; doi:10.1093/nar/21.4.847 [Abstract] [Print PDF] [Request Permissions]

Tim Oisson, Karl Ekwall, and Tarmo Ruusala: The silent P mating type locus in fission yeast contains two autonomously replicating sequences
Nucl. Acids Res. 1993 21: 855-861; doi:10.1093/nar/21.4.855 [Abstract] [Print PDF] [Request Permissions]

Patrick Midoux, Christina Mendes, Alain Legrand, Jacques Raimond, Roger Mayer, Michel Monsigny, and Annie Claude Roche: Specific gene transfer mediated by lactosylated poly-L-lysine into hepatoma cells
Nucl. Acids Res. 1993 21: 871-878; doi:10.1093/nar/21.4.871 [Abstract] [Print PDF] [Request Permissions]

Peter Brik Rasmussen, Lotte Søgaard-Andersen, and Alain Valentin-Hansen: Identification of the nucleotide sequence recognized by the cAMP-CRP dependent CytR repressor protein in the deoP2 promoter in E.coli
Nucl. Acids Res. 1993 21: 879-885; doi:10.1093/nar/21.4.879 [Abstract] [Print PDF] [Request Permissions]

Philip Mitchell, Katrin Stade, Monika Oßwald, and Richard Brimacombe: Site-directed cross-linking studies on the E.coli tRNA ribosome complex: determination of sites labelled with an aromatic azide attached to the variable loop or aminoacyl group of tRNA
Nucl. Acids Res. 1993 21: 887-896; doi:10.1093/nar/21.4.887 [Abstract] [Print PDF] [Request Permissions]

C. Gregori, A. Kahn, and A.-L. Pichard: Competition between transcription factors HNF1 and HNF3, and alternative cell-specific activation by DBP and C/EBP contribute to the regulation of the liver-specific aldolase B promoter
Nucl. Acids Res. 1993 21: 897-903; doi:10.1093/nar/21.4.897 [Abstract] [Print PDF] [Request Permissions]

Bohong Zhang, Tao Tao, Geoffery G. Wilson, and Robert M. Blumenthal: The M·AluI DNA-(cytosine C5)-methyltransferase has an unusually large, partially dispensable, variable region
Nucl. Acids Res. 1993 21: 905-911; doi:10.1093/nar/21.4.905 [Abstract] [Print PDF] [Request Permissions]

Richard Conrad, Ruey Fen Liou, and Thomas Blumenthal: Functional analysis of a C.elegans trans-splice acceptor
Nucl. Acids Res. 1993 21: 913-919; doi:10.1093/nar/21.4.913 [Abstract] [Print PDF] [Request Permissions]

Andrew P. Morby, Jennifer S. Turner, James W. Huckle, and Nigel J. Robinson: SmtB is a metal-dependent repressor of the cyanobacterial metallothionein gene smtA: identification of a Zn inhibited DNA-protein complex
Nucl. Acids Res. 1993 21: 921-925; doi:10.1093/nar/21.4.921 [Abstract] [Print PDF] [Request Permissions]

B. Breuer, B. Steuer, and A. Alonso: Basal level transcription of the histone H1⁰ gene is mediated by a 80 bp promoter fragment
Nucl. Acids Res. 1993 21: 927-934; doi:10.1093/nar/21.4.927 [Abstract] [Print PDF] [Request Permissions]

Fernando Rojo, Beatriz Nuez, Mario Mencla, and Margarita Salas: The main early and late promoters of Bacillus subtilis phage ø29 form unstable open complexes with ${sigma}$ ^A-RNA polymerase that are stabilized by DNA supercoiling
Nucl. Acids Res. 1993 21: 935-940; doi:10.1093/nar/21.4.935 [Abstract] [Print PDF] [Request Permissions]

C.EI Adlouni, G. Keith, G. Dirheimer, J. W. Szarkowski, and A. Przykorska: Rye nuclease I as a tool for structural studies of tRNAs with large variable arms
Nucl. Acids Res. 1993 21: 941-947; doi:10.1093/nar/21.4.941 [Abstract] [Print PDF] [Request Permissions]

Fabio Cobianchi, Cinzia Calvio, Monica Stoppini, Massimo Buvoli, and Silvano Riva: Phosphorylation of human hnRNP protein A1 abrogates in vitro strand annealing activity
Nucl. Acids Res. 1993 21: 949-955; doi:10.1093/nar/21.4.949 [Abstract] [Print PDF] [Request Permissions]

Jeffrey R. Jackson and Cheeptip Benyajati: DNA - histone interactions are sufficient to position single nucleosome juxtaposing Drosophila Adh adult enhancer and distal promoter
Nucl. Acids Res. 1993 21: 957-967; doi:10.1093/nar/21.4.957 [Abstract] [Print PDF] [Request Permissions]

William L. Trepicchio and Theodore G. Krontiris: IGH minisatellite suppression of USF-binding-site- and Eµ-mediated transcriptional activation of the adenovirus major late promoter
Nucl. Acids Res. 1993 21: 977-985; doi:10.1093/nar/21.4.977 [Abstract] [Print PDF] [Request Permissions]

Nasima Rahman Mansur, Katherine Meyer-Siegler, James C. Wurzer, and Michael A. Sirover: Cell cycle regulation of the glyceraldehyde3phosphate dehydrogenaseluracil DNA glycosylase gene in normal human cells
Nucl. Acids Res. 1993 21: 993-998; doi:10.1093/nar/21.4.993 [Abstract] [Print PDF] [Request Permissions]

Peter J. Good, Martha L. Rebbert, and lgor B. Dawid: Three new members of the RNP protein family in Xenopus
Nucl. Acids Res. 1993 21: 999-1006; doi:10.1093/nar/21.4.999 [Abstract] [Print PDF] [Request Permissions]

O. V. Matveeva and S. A. Shabalina: Intermolecular mRNA - rRNA hybridization and the distribution of potential interaction regions in murine 18s rRNA
Nucl. Acids Res. 1993 21: 1007-1011; doi:10.1093/nar/21.4.1007 [Abstract] [Print PDF] [Request Permissions]

Wolfgang Meißner, Rudi Holland, Rainer Waldschmidt, and Klaus H. Seifart: Transcription factor IIA stimulates the expression of classical pollll-genes
Nucl. Acids Res. 1993 21: 1013-1018; doi:10.1093/nar/21.4.1013 [Abstract] [Print PDF] [Request Permissions]

Peter J. Morris, Carolyn L. Dent, Christopher J. Ring, and David S. Latchman: The octamer binding site in the HPV16 regulatory region produces opposite effects on gene expression in cervical and non-cervical cells
Nucl. Acids Res. 1993 21: 1019-1023; doi:10.1093/nar/21.4.1019 [Abstract] [Print PDF] [Request Permissions]

Ivan Brukner, Mensur Dlakic, Ana Savic, Slavoljub Susic, Sándor Pongor, and Dietrich Suck: Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements
Nucl. Acids Res. 1993 21: 1025-1029; doi:10.1093/nar/21.4.1025 [Abstract] [Print PDF] [Request Permissions]

Sergei V. Belikov, Alexander I. Belgovsky, Olga V. Preobrazhenskaya, Vadim L. Karpov, and Andrei D. Mirzabekov: Two non-histone proteins are associated with the promoter region and histone HI with the transcribed region of active hsp-70 genes as revealed by UV-induced DNA-protein crosslinking in vivo
Nucl. Acids Res. 1993 21: 1031-1034; doi:10.1093/nar/21.4.1031 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

Bernd Epe, Hedda Henzl, Waldemar Adam, and Chantu R. Saha-Möller: Endonuclease-sensitive DNA modifications induced by acetone and acetophenone as photosensitizers
Nucl. Acids Res. 1993 21: 863-869; doi:10.1093/nar/21.4.863 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Peter M. Goodwin, Mitchell E. Johnson, John C. Martin, W.Patrick Ambrose, Babetta L. Marrone, James H. Jett, and Richard A. Keller: Rapid sizing of individual fluorescently stained DNA fragments by flow cytometry
Nucl. Acids Res. 1993 21: 803-806; doi:10.1093/nar/21.4.803 [Abstract] [Print PDF] [Request Permissions]

A.Christopher Boyd: Turbo cloning: a fast, efficient method for cloning PCR products and other blunt-ended DNA fragments into plasmids
Nucl. Acids Res. 1993 21: 817-821; doi:10.1093/nar/21.4.817 [Abstract] [Print PDF] [Request Permissions]

M. J. Carter and I. D. Milton: An inexpensive and simple method for DNA purifications on silica particles
Nucl. Acids Res. 1993 21: 1044; doi:10.1093/nar/21.4.1044 [Print PDF] [Request Permissions]

Jerzy Ostrowski and Karol Bomsztyk: Purification of DNA-binding proteins using tandem DNA- affinity column
Nucl. Acids Res. 1993 21: 1045-1046; doi:10.1093/nar/21.4.1045 [Print PDF] [Request Permissions]

Francesco S. Celi, Michael E. Zenilman, and Alan R Shuldiner: A rapid and versatile method to synthesize internal standards for competitive PCR
Nucl. Acids Res. 1993 21: 1047; doi:10.1093/nar/21.4.1047 [Print PDF] [Request Permissions]

Ousama M.-Faiz Zaghmout and Norma L. Trolinder: Simple and efficient method for directly electroporating Agrobacterium plasmid DNA into wheat callus cells
Nucl. Acids Res. 1993 21: 1048; doi:10.1093/nar/21.4.1048 [Print PDF] [Request Permissions]

Renu Mital, Urs Albrecht, and Daniel Schümperli: Detection of UV-induced RNA: protein crosslinks in snRNPs by oligonucleotides complementary to the snRNA
Nucl. Acids Res. 1993 21: 1049-1050; doi:10.1093/nar/21.4.1049 [Print PDF] [Request Permissions]

Joseph C. Colosi and Barbara Schaal: Tissue grinding with ball bearings and vortex mixer for DNA extraction
Nucl. Acids Res. 1993 21: 1051-1052; doi:10.1093/nar/21.4.1051 [Print PDF] [Request Permissions]

Errata:

EunRan Suh and Richard B. Waring: A phosphorothioate at the 3' splice-site inhibits the second splicing step in a group I intron
Nucl. Acids Res. 1993 21: 1054; doi:10.1093/nar/21.4.1054 [Abstract] [Print PDF] [Request Permissions]

Author index:

: A phosphorothioate at the 3' splice-site inhibits the second splicing step in a group I intron
Nucl. Acids Res. 1993 21: 1053; doi:10.1093/nar/21.4.1053 [Print PDF] [Request Permissions]

ENZYMOLOGY:

Vladimir N. Podust and Ulrich Hübscher: Lagging strand DNA synthesis by calf thymus DNA polymerases ${alpha}$ , ß, ${delta}$ and ${varepsilon}$ in the presence of auxiliary proteins
Nucl. Acids Res. 1993 21: 841-846; doi:10.1093/nar/21.4.841 [Abstract] [Print PDF] [Request Permissions]

Leszek A. Lyznik, Jon C. Mitchell, Lynne Hirayama, and Thomas K. Hodges: Activity of yeast FLP recombinase in maize and rice protoplasts
Nucl. Acids Res. 1993 21: 969-975; doi:10.1093/nar/21.4.969 [Abstract] [Print PDF] [Request Permissions]

Huimin Kong, Richard D. Morgan, Robert E. Maunus, and Ira. Schildkraut: A unique restriction endonuclease, Bcgl, from Bacillus coagulans
Nucl. Acids Res. 1993 21: 987-991; doi:10.1093/nar/21.4.987 [Abstract] [Print PDF] [Request Permissions]

SEQUENCE:

Jiro Kataoka, Masashi Miyano, Noriyuki Habuka, Chikara Masuta, and Akira Koiwai: A genomic gene for MAP, a ribosome-inactivating protein from Mirabilis jalapa, contains an intron
Nucl. Acids Res. 1993 21: 1035; doi:10.1093/nar/21.4.1035 [Print PDF] [Request Permissions]

Michael F. Minnick: Nucleotide sequence of the 5S ribosomal RNA gene of Bartonella bacilliformis
Nucl. Acids Res. 1993 21: 1036; doi:10.1093/nar/21.4.1036 [Print PDF] [Request Permissions]

T. Sarashina, T. Sakurai, Y. Watanabe, K. Kashima, T. Suzuki, J. Chiba, Y. Kita, T. Horiuchi, I. Saito, and T. Miyamura: Nucleotide sequence of the hepatitis C virus genome from a patient negative for anti-HCV by the first generation antibody assay
Nucl. Acids Res. 1993 21: 1037; doi:10.1093/nar/21.4.1037 [Print PDF] [Request Permissions]

Rob Larkin and Tom Guilfoyle: The second largest subunit of RNA polymerase II from Arabidopsis thaliana
Nucl. Acids Res. 1993 21: 1038; doi:10.1093/nar/21.4.1038 [Print PDF] [Request Permissions]

Jaygopal Nair, David Rouse, and Sheldon Morris: Nucleotide sequence analysis of the ribosomal S12 gene of Mycobacterium intracellulare
Nucl. Acids Res. 1993 21: 1039; doi:10.1093/nar/21.4.1039 [Print PDF] [Request Permissions]

Kit Tilly and Jim Campbell: A Borrelia burgdorferi homolog of the Escherichia coli rho gene
Nucl. Acids Res. 1993 21: 1040; doi:10.1093/nar/21.4.1040 [Print PDF] [Request Permissions]

John Meissner: Taql is a single cut enzyme for HPV-18
Nucl. Acids Res. 1993 21: 1041; doi:10.1093/nar/21.4.1041 [Print PDF] [Request Permissions]

Susana López and Carlos F. Arias: Protein NS26 is highly conserved among porcine rotavirus strains
Nucl. Acids Res. 1993 21: 1042; doi:10.1093/nar/21.4.1042 [Print PDF] [Request Permissions]

Andreas Tobler, Edgar Schreiber, and Edgar Fontana: The human Oct-6 POU transcription factor lacks the first 50 amino acids of its murine counterpart
Nucl. Acids Res. 1993 21: 1043; doi:10.1093/nar/21.4.1043 [Print PDF] [Request Permissions]

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