Nucleic Acids Research

COMPUTATIONAL BIOLOGY:

Shu-Yun Le, Jih-H. Chen, and Jacob V. Maizel, Jr

Prediction of alternative RNA secondary structures based on fluctuating thermodynamic parameters
Nucl. Acids Res. 1993 21: 2173-2178; doi:10.1093/nar/21.9.2173 [Abstract] [Print PDF] [Request Permissions]  

MOLECULAR BIOLOGY:

Wendy Baubonis and Brian Sauer

Genomic targeting with purified Cre recombinase
Nucl. Acids Res. 1993 21: 2025-2029; doi:10.1093/nar/21.9.2025 [Abstract] [Print PDF] [Request Permissions]  

Anne Kuhn, Victor Stefanovsky, and Ingrid Grummt

The nucleolar transcription activator UBF relieves Ku antigen-mediated repression of mouse ribosomal gene transcription
Nucl. Acids Res. 1993 21: 2057-2063; doi:10.1093/nar/21.9.2057 [Abstract] [Print PDF] [Request Permissions]  

Susan Carson and Michael V. Wiles

Far upstream regions of class II MHC Ea are necessary for position-independent, copy-dependent expression of Ea transgene
Nucl. Acids Res. 1993 21: 2065-2072; doi:10.1093/nar/21.9.2065 [Abstract] [Print PDF] [Request Permissions]  

Manfred Suckow, Brigitte von Wilcken-Bergmann, and Benno Mller-Hill

The DNA binding specificity of the basic region of the yeast transcriptional activator GCN4 can be changed by substitution of a single amino acid
Nucl. Acids Res. 1993 21: 2081-2086; doi:10.1093/nar/21.9.2081 [Abstract] [Print PDF] [Request Permissions]  

Josep M. Casacuberta and Marie-Angèle Grandbastien

Characterisation of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon
Nucl. Acids Res. 1993 21: 2087-2093; doi:10.1093/nar/21.9.2087 [Abstract] [Print PDF] [Request Permissions]  

Ingrid Eftedal, Per H. Guddal, Geir Slupphaug, Gunnar Volden, and Hans E. Krokan

Consensus sequences for good and poor removal of uracil from double stranded DNA by uracil-DNA glycosylase
Nucl. Acids Res. 1993 21: 2095-2101; doi:10.1093/nar/21.9.2095 [Abstract] [Print PDF] [Request Permissions]  

Chris M. Brown, Kim K. McCaughan, and Warren P. Tate

Two regions of the Escherichia cqli 16S ribosomal RNA are important for decoding stop signals in polypeptide chain termination
Nucl. Acids Res. 1993 21: 2109-2115; doi:10.1093/nar/21.9.2109 [Abstract] [Print PDF] [Request Permissions]  

Yue Xiong, William D. Burke, and Thomas H. Eickbush

Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region
Nucl. Acids Res. 1993 21: 2117-2123; doi:10.1093/nar/21.9.2117 [Abstract] [Print PDF] [Request Permissions]  

Isao Suetake, Shoji Tajima, and Akira Asano

Identification of two novel mouse nuclear proteins that bind selectively to a methylated c-Myc recognizing sequence
Nucl. Acids Res. 1993 21: 2125-2130; doi:10.1093/nar/21.9.2125 [Abstract] [Print PDF] [Request Permissions]  

John U. Skoog and L. James Maher, III

Repression of bacteriophage promoters by DNA and RNA oligonucleotides
Nucl. Acids Res. 1993 21: 2131-2138; doi:10.1093/nar/21.9.2131 [Abstract] [Print PDF] [Request Permissions]  

Kelly G. Ten Hagen and Stanley N. Cohen

Timing of replication of beta satellite repeats of human chromosomes
Nucl. Acids Res. 1993 21: 2139-2142; doi:10.1093/nar/21.9.2139 [Abstract] [Print PDF] [Request Permissions]  

Jean-Philippe Girard, Michèle Caizergues-Ferrer, and Bruno Lapeyre

The SpGARI gene of Schizosaccharomyces pombe encodes the functional homologue of the snoRNP protein GAR1 of Saccharomyces cerevisiae
Nucl. Acids Res. 1993 21: 2149-2155; doi:10.1093/nar/21.9.2149 [Abstract] [Print PDF] [Request Permissions]  

Patrice J. Morin, Gita S. Subramanian, and Thomas D. Gilmore

GAL4-lB and GAL4-lB activate transcription by different mechanisms
Nucl. Acids Res. 1993 21: 2157-2163; doi:10.1093/nar/21.9.2157 [Abstract] [Print PDF] [Request Permissions]  

E. Desmarais, S. Vigneron, C. Buresi, F. Cambien, J.P. Cambou, and G. Roizes

Variant mapping of the Apo(B) AT rich minisatellite. Dependence on nucleotide sequence of the copy number variations. Instability of the non-canonical alleles
Nucl. Acids Res. 1993 21: 2179-2184; doi:10.1093/nar/21.9.2179 [Abstract] [Print PDF] [Request Permissions]  

Alain Bessis, Nathalie Savatier, Anne Devillers-Thiéry, Stéphane Bejanin, and Jean-Pierre Changeux

Negative regulatory elements upstream of a novel exon of the neuronal nicotinic acetylcholine receptor 2 subunit gene
Nucl. Acids Res. 1993 21: 2185-2192; doi:10.1093/nar/21.9.2185 [Abstract] [Print PDF] [Request Permissions]  

Kenji Lkehara and Eriko Okazawa

Unusually biased nucleotide sequences on sense strands of Flavobacterium sp. genes produce nonstop frames on the corresponding antisense strands
Nucl. Acids Res. 1993 21: 2193-2199; doi:10.1093/nar/21.9.2193 [Abstract] [Print PDF] [Request Permissions]  

I.A. AIexandrov, L.I. Medvedev, T.D. Mashkova, L.L. Kisselev, L.Y. Romanova, and Y.B. Yurov

Definition of a new alpha satellite suprachromosomal family characterized by monomeric organization
Nucl. Acids Res. 1993 21: 2209-2215; doi:10.1093/nar/21.9.2209 [Abstract] [Print PDF] [Request Permissions]  

Athena Andreadis, Paul E. Nisson, Kenneth S. Kosik, and Paul C. Watkins

The exon trapping assay partly discriminates against alternatively spliced exons
Nucl. Acids Res. 1993 21: 2217-2221; doi:10.1093/nar/21.9.2217 [Abstract] [Print PDF] [Request Permissions]  

Luz Colón-Teicher, Leigh S. Wise, Jeffrey J. Martino, Leonard Baskin, George Sakoulas, Robert E. Pollack, and Suzie Chen

Genomic sequences capable of committing mouse and rat fibroblasts to adipogenesis
Nucl. Acids Res. 1993 21: 2223-2228; doi:10.1093/nar/21.9.2223 [Abstract] [Print PDF] [Request Permissions]  

llene Karsch-Mizrachi and Susan R. Haynes

The Rb97D gene encodes a potential RNA-binding protein required for spermatogenesis in Drosophila
Nucl. Acids Res. 1993 21: 2229-2235; doi:10.1093/nar/21.9.2229 [Abstract] [Print PDF] [Request Permissions]  

Ellen J. Baker and Peggy Liggit

Accelerated poly(A) loss and mRNA stabilization are independent effects of protein synthesis inhibition on -tubulin mRNA in Chlamydomonas
Nucl. Acids Res. 1993 21: 2237-2246; doi:10.1093/nar/21.9.2237 [Abstract] [Print PDF] [Request Permissions]  

CHEMISTRY:

Richard I. Hogrefe, Morteza M. Vaghefi, Mark A. Reynolds, Kevin M. Young, and Lyle J. Arnold, Jr

Deprotection of methylphosphonate oligonucleotides using a novel one-pot procedure
Nucl. Acids Res. 1993 21: 2031-2038; doi:10.1093/nar/21.9.2031 [Abstract] [Print PDF] [Request Permissions]  

Janet H. Gommers-Ampt, Adriano J.R. Teixeira, Gerrit van de Werken, Willem J. van Dijk, and Piet Borst

The identification of hydroxymethyluracil in DNA of Trypanosoma brucei
Nucl. Acids Res. 1993 21: 2039-2043; doi:10.1093/nar/21.9.2039 [Abstract] [Print PDF] [Request Permissions]  

Mark S. Searle and Dudley H. Williams

On the stability of nucleic acid structures in solution: enthalpy - entropy compensations, internal rotations and reversibility
Nucl. Acids Res. 1993 21: 2051-2056; doi:10.1093/nar/21.9.2051 [Abstract] [Print PDF] [Request Permissions]  

Michelle M. Hanna, Yuying Zhang, Jack C. Reidling, Matthew J. Thomas, and Jerry Jou

Synthesis and characterization of a new photocrosslinking CTP analog and its use in photoaffinity labeling E.coli and T7 RNA polymerases
Nucl. Acids Res. 1993 21: 2073-2079; doi:10.1093/nar/21.9.2073 [Abstract] [Print PDF] [Request Permissions]  

METHODS:

Vadim Demidov, Maxim D. Frank-Kamenetskii, Michael Egholm, Ole Buchardt, and Peter E. Nielsen

Sequence selective double strand DNA cleavage by Peptide Nucleic Acid (PNA) targeting using nuclease S1
Nucl. Acids Res. 1993 21: 2103-2107; doi:10.1093/nar/21.9.2103 [Abstract] [Print PDF] [Request Permissions]  

Yixin Wang and Ray Wu

A new method for specific cleavage of megabase-size chromosomal DNA by -terminase
Nucl. Acids Res. 1993 21: 2143-2147; doi:10.1093/nar/21.9.2143 [Abstract] [Print PDF] [Request Permissions]  

Wen-ping Chen and Tsong-teh Kuo

A simple and rapid method for the preparation of gram-negative bacterial genomic DNA
Nucl. Acids Res. 1993 21: 2260; doi:10.1093/nar/21.9.2260 [Print PDF] [Request Permissions]  

Per Guldberg and Flemming Guttler

A simple method for identification of point mutations using denaturing gradient gel electrophoresis
Nucl. Acids Res. 1993 21: 2261-2262; doi:10.1093/nar/21.9.2261 [Print PDF] [Request Permissions]  

Gavin R. Screaton, Charles R.M. Bangham, and John I. Bell

Direct sequencing of single primer PCR products: a rapid method to achieve short chromosomal walks
Nucl. Acids Res. 1993 21: 2263-2264; doi:10.1093/nar/21.9.2263 [Print PDF] [Request Permissions]  

Peter Waterhouse, Andrew D. Griffiths, Kevin S. Johnson, and Greg Winter

Combinatorial infection and in vivo recombination: a strategy for making large phage antibody repertoires
Nucl. Acids Res. 1993 21: 2265-2266; doi:10.1093/nar/21.9.2265 [Print PDF] [Request Permissions]  

Uwe Maskos and Edwin M. Southern

A novel method for the analysis of multiple sequence variants by hybridisation to oligonucleotides
Nucl. Acids Res. 1993 21: 2267-2268; doi:10.1093/nar/21.9.2267 [Print PDF] [Request Permissions]  

Uwe Maskos and Edwin M. Southern

A novel method for the parallel analysis of multiple mutations in multiple samples
Nucl. Acids Res. 1993 21: 2269-2270; doi:10.1093/nar/21.9.2269 [Print PDF] [Request Permissions]  

Marie-Laure Yaspo, Michael A. North, and Hans Lehrach

Exon-enriched probe derived from a human chromosome 21 YAC by exon-amplification
Nucl. Acids Res. 1993 21: 2271-2272; doi:10.1093/nar/21.9.2271 [Print PDF] [Request Permissions]  

Boro Dropulió, Nina H. Lin, and Kuan-Teh Jeang

A method to increase the cumulative cleavage efficiency of ribozymes: thermal cycling
Nucl. Acids Res. 1993 21: 2273-2274; doi:10.1093/nar/21.9.2273 [Print PDF] [Request Permissions]  

Hans E. Johansson, Brian S. Sproat, and Ojar Melefors

Reverse transcription using nuclease resistant primers
Nucl. Acids Res. 1993 21: 2275-2276; doi:10.1093/nar/21.9.2275 [Print PDF] [Request Permissions]  

Frank Marini, III, Amyr Naeem, and Jean-Numa Lapeyre

An efficient 1-tube PCR method for internal site-directed mutagenesis of large amplified molecules
Nucl. Acids Res. 1993 21: 2277-2278; doi:10.1093/nar/21.9.2277 [Print PDF] [Request Permissions]  

Vladimir V. Didenko

Polyethylene tube: an alternative support for synthesis and purification of biotin-labeled single-stranded DNA probes
Nucl. Acids Res. 1993 21: 2279-2280; doi:10.1093/nar/21.9.2279 [Print PDF] [Request Permissions]  

Kevin Cuddy, Brian Foley, Jonathan S. Jaffe, and David Gillespie

RT-PCR with affinity-captured mRNA
Nucl. Acids Res. 1993 21: 2281; doi:10.1093/nar/21.9.2281 [Print PDF] [Request Permissions]  

Corrigenda:

W. Dunnick, G.Z. Hertz, L. Scappino, and C. Gritzmacher

Corrigenda: DNA sequences at immunoglobulin switch region recombination sites
Nucl. Acids Res. 1993 21: 2285; doi:10.1093/nar/21.9.2285 [Abstract] [Print PDF] [Request Permissions]  

J.R. Jackson and C. Benyajati

Corrigenda: DNA-histone interactions are sufficient to position a single nucleosome juxtaposing Drosophila Adh adult enhancer and distal promoter
Nucl. Acids Res. 1993 21: 2286; doi:10.1093/nar/21.9.2286 [Abstract] [Print PDF] [Request Permissions]  

Erratum:

C.G. Huber, P.J. Oefher, E. Preuss, and G.K. Bonn

Erratum: High-resolution liquid chromatography of DNA fragments on non-porous poly(styrene-divinylbenzene) particles
Nucl. Acids Res. 1993 21: 2284; doi:10.1093/nar/21.9.2284 [Abstract] [Print PDF] [Request Permissions]  

Author index:

Author index
Nucl. Acids Res. 1993 21: 2283; doi:10.1093/nar/21.9.2283 [Print PDF] [Request Permissions]  

ENZYMOLOGY:

Svein Bjelland, Magnar Bjørås, and Erling Seeberg

Excision of 3-methylguanine from alkylated DNA by 3-methyladenine DNA glycosylase I of Escherichia coli
Nucl. Acids Res. 1993 21: 2045-2049; doi:10.1093/nar/21.9.2045 [Abstract] [Print PDF] [Request Permissions]  

SEQUENCE:

Joris J. Heus, Ben J.M. Zonneveld, Kerry S. BIoom, H. Yde Steensma, and Johan A. van den Berg

The nucleosome repeat length of Kluyveromyces lactis is 16 bp longer than that of Saccharomyces cerevisiae
Nucl. Acids Res. 1993 21: 2247-2248; doi:10.1093/nar/21.9.2247 [Print PDF] [Request Permissions]  

Jesús Navas-Castillo, Frédéric Laigret, and Joseph Marie Bové

16S rDNA sequence analysis of Acholeplasma seiffertii, a mollicute from plant surfaces, and its transfer to Mesoplasma, a new genus in the spiroplasma phylogenetic group
Nucl. Acids Res. 1993 21: 2249; doi:10.1093/nar/21.9.2249 [Print PDF] [Request Permissions]  

Baoming Jiang, Hiroshi Tsunemitsu, Jon R. Gentsch, Linda J. Saif, and Roger I. GIass

Nucleotide sequences of genes 6 and 10 of a bovine group C rotavirus
Nucl. Acids Res. 1993 21: 2250; doi:10.1093/nar/21.9.2250 [Print PDF] [Request Permissions]  

Doris Langer and Wolfram Zillig

Putative tflls gene of Sulfolobus acidocaldarius encoding an archaeal transcription elongation factor is situated directly downstream of the gene for a small subunit of DNA-dependent RNA polymerase
Nucl. Acids Res. 1993 21: 2251; doi:10.1093/nar/21.9.2251 [Print PDF] [Request Permissions]  

Jerzy Jurka

A new subfamily of recently retroposed human Alu repeats
Nucl. Acids Res. 1993 21: 2252; doi:10.1093/nar/21.9.2252 [Print PDF] [Request Permissions]  

Francesco Cecconi, Federica Venanzetti, and Paolo Mariottini

Sequence of the mitochondrial tRNA^Thr and tRNA^Pro; genes from European seabass, Dicentrarchus labrax
Nucl. Acids Res. 1993 21: 2253; doi:10.1093/nar/21.9.2253 [Print PDF] [Request Permissions]  

M.D. Sussman, Z. Lu, G.F. Kutish, C.A. Afonso, and D.L. Rock

The identification of an African swine fever gene with conserved helicase motifs and a striking homology to herpes virus origin binding protein, UL9
Nucl. Acids Res. 1993 21: 2254; doi:10.1093/nar/21.9.2254 [Print PDF] [Request Permissions]  

Mihály Kis, Gábor Jakab, Tamás Pollák, Christiane Branlant, and Ferenc Solymosy

Nucleotide sequence of U1 RNA from a green alga, Chlamydomonas reinhardtii
Nucl. Acids Res. 1993 21: 2255; doi:10.1093/nar/21.9.2255 [Print PDF] [Request Permissions]  

Joan Riera and Jordi Barbé

Sequence of the Providencia rettgeri lexA gene and its control region
Nucl. Acids Res. 1993 21: 2256; doi:10.1093/nar/21.9.2256 [Print PDF] [Request Permissions]  

Alister C. Ward, Ahmed A. Azad, Ian G. Macreadie, and Jennifer L. McKimm-Breschkin

Complete nucleotide sequence of the non-structural gene of the human influenza virus strain A/WS/33
Nucl. Acids Res. 1993 21: 2257; doi:10.1093/nar/21.9.2257 [Print PDF] [Request Permissions]  

S. Preisler-Adams, H.-J. Schlayer, T. Peters, R. Korp, and J. Rasenack

Complete nucleotide sequence of a hepatitis B virus, subtype adw2, and identification of three types of C open reading frame
Nucl. Acids Res. 1993 21: 2258; doi:10.1093/nar/21.9.2258 [Print PDF] [Request Permissions]  

Fung-Mei Cheng, Martyn K. Darby, and Keith E. Joho

Correction of the nucleotide and amino acid sequence of Xenopus laevis 42Sp50
Nucl. Acids Res. 1993 21: 2259; doi:10.1093/nar/21.9.2259 [Print PDF] [Request Permissions]  

STRUCTURAL BIOLOGY:

Alicja B. Kujawa, Gabrièle Drugeon, Danuta Hulanicka, and Anne-Lise Haenni

Structural requirements for efficient translational frameshifting in the synthesis of the putative viral RNA-dependent RNA polymerase of potato leafroll virus
Nucl. Acids Res. 1993 21: 2165-2171; doi:10.1093/nar/21.9.2165 [Abstract] [Print PDF] [Request Permissions]  

Vinod D. Kumar and Irene T. Weber

Crystal structure of a Z-DNA hexamer d(CGCICG) at 1.7 Å resolution: inosine-cytidine base-pairing, and comparison with other Z-DNA structures
Nucl. Acids Res. 1993 21: 2201-2208; doi:10.1093/nar/21.9.2201 [Abstract] [Print PDF] [Request Permissions]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.