Nucleic Acids Research

COMPUTATIONAL BIOLOGY:

Angelo Pavesi, Franco Conterio, Angelo Bolchi, Giorgio Dieci, and Simone Ottonello

Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix anaylsis of transcriptional control regions
Nucl. Acids Res. 1994 22: 1247-1256; doi:10.1093/nar/22.7.1247 [Abstract] [Print PDF] [Request Permissions]  

SURVEY AND SUMMARY:

Francine B. Perler, Elaine O. Davis, Gary E. Dean, Frederick S. Gimble, William E. Jack, Norma Neff, Christopher J. Noren, Jeremy Thorner, and Marlene Belfort

Protein splicing elements: inteins and exteins — a definition of terms and recommended nomenclature
Nucl. Acids Res. 1994 22: 1125-1127; doi:10.1093/nar/22.7.1125 [Print PDF] [Request Permissions]  

MOLECULAR BIOLOGY:

Carole H. Sellem and Léon Belcour

The in vivo use of alternate 3'-splice sites in group I introns
Nucl. Acids Res. 1994 22: 1135-1137; doi:10.1093/nar/22.7.1135 [Abstract] [Print PDF] [Request Permissions]  

Michael A. Hollingsworth, Christina Closken, Ann Harris, Claudia D. McDonald, Gurcharan S. Pahwa, and L.James Maher, III

A nuclear factor that binds purine-rich, single-stranded oligonucleotides derived from S1-sensitive elements upstream of the CFTR gene and the MUC1 gene
Nucl. Acids Res. 1994 22: 1138-1146; doi:10.1093/nar/22.7.1138 [Abstract] [Print PDF] [Request Permissions]  

Yacine Laabi, Marie-Pierre Gras, Jean-Claude Brouet, Roland Berger, Christian-Jacques Larsen, and Andréas Tsapis

The BCMA gene, preferentially expressed during B lymphoid maturation, is bidirectionally transcribed
Nucl. Acids Res. 1994 22: 1147-1154; doi:10.1093/nar/22.7.1147 [Abstract] [Print PDF] [Request Permissions]  

Piet De Vos, Jacky Schmitt, Guido Verhoeven, and Hendrik G. Stunnenberg

Human androgen receptor expressed in HeLa cells activates transcription in vitro
Nucl. Acids Res. 1994 22: 1161-1166; doi:10.1093/nar/22.7.1161 [Abstract] [Print PDF] [Request Permissions]  

Volker Knoop and Axel Brennicke

Evidence for a group II intron in Escherichia coli inserted into a highly conserved reading frame associated with mobile DNA sequences
Nucl. Acids Res. 1994 22: 1167-1171; doi:10.1093/nar/22.7.1167 [Abstract] [Print PDF] [Request Permissions]  

Henri Gruffat and Alain Sergeant

Characterization of the DNA-binding site repertoire for the Epstein - Barr virus transcription factor R
Nucl. Acids Res. 1994 22: 1172-1178; doi:10.1093/nar/22.7.1172 [Abstract] [Print PDF] [Request Permissions]  

Ko Kato, Yasutaka Makino, Toshihiko Kishimoto, Jun Yamauchi, Shigeaki Kato, Masami Muramatsu, and Taka-aki Tamura

Multimerization of the mouse TATA-binding protein (TBP) driven by its C-terminal conserved domain
Nucl. Acids Res. 1994 22: 1179-1185; doi:10.1093/nar/22.7.1179 [Abstract] [Print PDF] [Request Permissions]  

Pascal J. Lopez, Isabelle lost, and Marc Dreyfus

The use of a tRNA as a transcriptional reporter: the T7 late promoter is extremely efficient in Escherichia coli but its transcripts are poorly expressed
Nucl. Acids Res. 1994 22: 1186-1193; doi:10.1093/nar/22.7.1186 [Abstract] [Print PDF] [Request Permissions]  

Tauqir Y. Goraya, Sean P. Kessler, Ravi S. Kumar, Janice Douglas, and Ganes C. Sen

Identification of positive and negative transcriptional regulatory elements of the rabbit angiotensin-converting enzyme gene
Nucl. Acids Res. 1994 22: 1194-1201; doi:10.1093/nar/22.7.1194 [Abstract] [Print PDF] [Request Permissions]  

Krzysztof Jagla, Irina Stanceva, Guy Dretzen, Françis Bellard, and Maria Bellard

A distinct class of homeodomain proteins is encoded by two sequentially expressed Drosophila genes from the 93D/E cluster
Nucl. Acids Res. 1994 22: 1202-1207; doi:10.1093/nar/22.7.1202 [Abstract] [Print PDF] [Request Permissions]  

Françoise Rotomondo and Georges F. Carle

Genetic selection of meiotic and mitotic recombinant yeast artificial chromosomes
Nucl. Acids Res. 1994 22: 1208-1214; doi:10.1093/nar/22.7.1208 [Abstract] [Print PDF] [Request Permissions]  

Jens P. von Kries, Friedrich Buck, and Wolf H. Sträting

Chicken MAR binding protein p120 is identical to human heterogeneous nuclear ribonucleoprotein (hnRNP) U
Nucl. Acids Res. 1994 22: 1215-1220; doi:10.1093/nar/22.7.1215 [Abstract] [Print PDF] [Request Permissions]  

Chris B. Russell, Dean Fraga, and Robert D. Hinrichsen

Extremely short 20–33 nucleotide introns are the standard length in Paramecium tetraurelia
Nucl. Acids Res. 1994 22: 1221-1225; doi:10.1093/nar/22.7.1221 [Abstract] [Print PDF] [Request Permissions]  

Kim-Chew Lim, Hajime Ishihara, Robert D. Riddle, Zhuoying Yang, Nancy Andrews, Masayuki Yamamoto, and James Douglas Engel

Structure and regulation of the chicken erythroid -aminolevulinate synthase gene
Nucl. Acids Res. 1994 22: 1226-1233; doi:10.1093/nar/22.7.1226 [Abstract] [Print PDF] [Request Permissions]  

R.A. Meldrum, W.S. Meaking, and C.W. Wharton

The kinetics and mechanism of repair of UV induced DNA damage in mammalian cells. The use of ‘caged’ nucleotides and electroporation to study short time course events in DNA repair
Nucl. Acids Res. 1994 22: 1234-1241; doi:10.1093/nar/22.7.1234 [Abstract] [Print PDF] [Request Permissions]  

C. Gregori, A. Kahn, and A.L. Pichard

Activity of the rat liver-specific aldolase B promoter is restrained by HNF3
Nucl. Acids Res. 1994 22: 1242-1246; doi:10.1093/nar/22.7.1242 [Abstract] [Print PDF] [Request Permissions]  

Richard W. McKenzie, Jie Hu, and Mark D. Brennan

Redundant cis-acting elements control expression of the Drosophila affinidisjuncta Adh gene in the larval fat body
Nucl. Acids Res. 1994 22: 1257-1264; doi:10.1093/nar/22.7.1257 [Abstract] [Print PDF] [Request Permissions]  

Rashmi Gopal-Srivastava and Joram Piatigorsky

Identification of a lens-specific regulatory region (LSR) of the murine B-crystallin gene
Nucl. Acids Res. 1994 22: 1281-1286; doi:10.1093/nar/22.7.1281 [Abstract] [Print PDF] [Request Permissions]  

Doug Barrick, Keith Villanueba, John Childs, Rhonda Kalil, Thomas D. Schneider, Charles E. Lawrence, Larry Gold, and Gary D. Stormo

Quantitative analysis of ribosome binding sites in E.coli
Nucl. Acids Res. 1994 22: 1287-1295; doi:10.1093/nar/22.7.1287 [Abstract] [Print PDF] [Request Permissions]  

Warren K. Hoeffler, Arthur D. Levinson, and Eugene A. Bauer

Activation of c-Jun transcription factor by substitution of a charged residue in its N-terminal domain
Nucl. Acids Res. 1994 22: 1305-1312; doi:10.1093/nar/22.7.1305 [Abstract] [Print PDF] [Request Permissions]  

RNA:

Suzanne M. Hess, David R. Stanford, and Anita K. Hopper

SRD1, a S.cerevisiae gene affecting pre-rRNA processing contains a C₂/C₂ zinc finger motif
Nucl. Acids Res. 1994 22: 1265-1271; doi:10.1093/nar/22.7.1265 [Abstract] [Print PDF] [Request Permissions]  

CHEMISTRY:

Suresh C. Srivastava, Syed Kazim Raza, and Rakesh Misra

1,N⁶-etheno deoxy and ribo adenoGine and 3,N⁴-etheno deoxy and ribo cytidine phosphoramidites. Strongly fluorescent structures for selective introduction in defined sequence DNA and RNA molecules
Nucl. Acids Res. 1994 22: 1296-1304; doi:10.1093/nar/22.7.1296 [Abstract] [Print PDF] [Request Permissions]  

METHODS:

A. Rus Hoelzel

Improved resolution of (CAC)_n DNA fingerprints
Nucl. Acids Res. 1994 22: 1315; doi:10.1093/nar/22.7.1315 [Print PDF] [Request Permissions]  

Jill K. SIack, Charles V. Lowry, and Ann M. Carroll

HASTEN: A technique to identify the primary structure of terminal DNA hairpins
Nucl. Acids Res. 1994 22: 1316-1317; doi:10.1093/nar/22.7.1316 [Print PDF] [Request Permissions]  

Renata M.J. Hamvas, Fiona Francis, Roger D. Cox, Dean Nizetic, Michelle E. Goldsworthy, Stephen D.M. Brown, and Hans R. Lehrach

Rapid restriction analysis of YAC clones
Nucl. Acids Res. 1994 22: 1318-1319; doi:10.1093/nar/22.7.1318 [Print PDF] [Request Permissions]  

Yu.E. Khudyakov, L. Gaur, J. Singh, P. Patel, and H.A. Fields

Primer specific solid-phase detection of PCR products
Nucl. Acids Res. 1994 22: 1320-1321; doi:10.1093/nar/22.7.1320 [Print PDF] [Request Permissions]  

Th. Coche, M. Dewez, and M.-C. Beckers

Generation of an unlimited supply of a subtracted probe using magnetic beads and PCR
Nucl. Acids Res. 1994 22: 1322-1323; doi:10.1093/nar/22.7.1322 [Print PDF] [Request Permissions]  

Corrigendum:

E. Bertrand, R. Pictet, and T. Grange

Can hammerhead ribozymes be efficient tools to inactivate gene function?
Nucl. Acids Res. 1994 22: 1326; doi:10.1093/nar/22.7.1326 [Abstract] [Print PDF] [Request Permissions]  

Erratum:

Y. Itoh-Lindstrom and M. Leffak

Alteration of in vitro DNA synthesis in the alpha globin locus of chick embryo fibroblasts due to in vivo activity of Rous sarcoma virus pp60^src
Nucl. Acids Res. 1994 22: 1326; doi:10.1093/nar/22.7.1326-a [Abstract] [Print PDF] [Request Permissions]  

Author index:

Author index
Nucl. Acids Res. 1994 22: 1325; doi:10.1093/nar/22.7.1325 [Print PDF] [Request Permissions]  

ENZYMOLOGY:

Anthi Georgaki, Narendra Tuteja, Birgit Sturzenegger, and Ulrich Hübscher

Calf thymus DNA helicase F, a replication protein A copurifying enzyme
Nucl. Acids Res. 1994 22: 1128-1134; doi:10.1093/nar/22.7.1128 [Abstract] [Print PDF] [Request Permissions]  

Hieronim Jakubowski

Editing function of Escherichia coli cysteinyl-tRNA synthetase: cyclization of cysteine to cysteine thiolactone
Nucl. Acids Res. 1994 22: 1155-1160; doi:10.1093/nar/22.7.1155 [Abstract] [Print PDF] [Request Permissions]  

GENOME STRUCTURE AND MAPPING:

Charles B. Lawrence and Victor V. Solovyev

Assignment of position-specific error probability to primary DNA sequence data
Nucl. Acids Res. 1994 22: 1272-1280; doi:10.1093/nar/22.7.1272 [Abstract] [Print PDF] [Request Permissions]  

SHORT REPORTS:

René De Mot, Geert Schoofs, and Jos Vanderleyden

A putative regulatory gene downstream of recA is conserved in Gram-negative and Gram-positive bacteria
Nucl. Acids Res. 1994 22: 1313-1314; doi:10.1093/nar/22.7.1313 [Print PDF] [Request Permissions]  

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