Nucl. Acids Res. -- Table of Contents (23 [15, August 11 1995])

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Contents: Volume 23, Number 15    11 August 1995    [Index by Author]

       COMPUTATIONAL BIOLOGY

       MOLECULAR BIOLOGY

       RNA

       CHEMISTRY

       METHODS

       Author index

       ENZYMOLOGY

       GENOME STRUCTURE AND MAPPING

       STRUCTURAL BIOLOGY

Other Issues:

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Front Matter (Print PDF)

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

COMPUTATIONAL BIOLOGY:

Gwennaele A. Flchant and Yves Quentln: A frameshift error detection algorithm for DNA sequencing projects
Nucl. Acids Res. 1995 23: 2900-2908; doi:10.1093/nar/23.15.2900 [Abstract] [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

Ron P.H. Dirks, Carla Onnekink, Hans J. Jansen, Aard de Jong, and Henri P.J. Bloemers: A novel human c-sis mRNA species is transcribed from a promoter in c-sis intron 1 and contains the code for an alternative PDGF B-like protein
Nucl. Acids Res. 1995 23: 2815-2822; doi:10.1093/nar/23.15.2815 [Abstract] [Print PDF] [Request Permissions]

Makoto Kobayashi and Kiyoshi Kawakami: ATF-CREB heterodimer is involved in constitutive expression of the housekeeping Na,-ATPase ${alpha}$ subunit gene
Nucl. Acids Res. 1995 23: 2848-2855; doi:10.1093/nar/23.15.2848 [Abstract] [Print PDF] [Request Permissions]

Hiroyuki Kamiya, Hiroyuki Miura, Naoko Murata-Kamiya, Hiroyuki Ishikawa, Tomoki Sakaguchi, Hideo Inoue, Toshiro Sasaki, Chlkahide Masutanl, Fumio Hanaoka, Susumu Nishimura, and Eiko Ohtsuka: 8-Hydroxyadenine (7, 8-dihydro-8-Oxoadenine) induces misincorporation in in vitro DNA synthesis and mutations in NIH 3T3 cells
Nucl. Acids Res. 1995 23: 2893-2899; doi:10.1093/nar/23.15.2893 [Abstract] [Print PDF] [Request Permissions]

Paolo Fruscoloni, Michela Zamboni, Gianna Panetta, Augusto De Paolis, and Glauco P. Tocchini-Valentinl: Mutational analysis of the transcription start site of the yeast tRNA^Leu₃ gene
Nucl. Acids Res. 1995 23: 2914-2918; doi:10.1093/nar/23.15.2914 [Abstract] [Print PDF] [Request Permissions]

Androniki Kretsovali and Joseph Papamatheakis: A novel IL-4 responsive element of the E ${alpha}$ MHC class II promoter that binds to an inducible factor
Nucl. Acids Res. 1995 23: 2919-2928; doi:10.1093/nar/23.15.2919 [Abstract] [Print PDF] [Request Permissions]

Shu-Chun Teng, Sharon X. Wang, and Abram Gabriel: A new non-LTR retrotransposon porvides evidence for multiple distinct site-specific elements in Crithidia faciculata miniexon arrays
Nucl. Acids Res. 1995 23: 2929-2936; doi:10.1093/nar/23.15.2929 [Abstract] [Print PDF] [Request Permissions]

David V. Holberton and Jonathan Marshall: Analysis of consensus sequence patterns in Giardia cytoskeleton gene promoters
Nucl. Acids Res. 1995 23: 2945-2953; doi:10.1093/nar/23.15.2945 [Abstract] [Print PDF] [Request Permissions]

Ginam Cho, Jiyoung Kim, Hyune Mo Rho, and Guhung Jung: Structure-function analysis of the DNA binding domain of Saccharomyces cerevisiae ABF1
Nucl. Acids Res. 1995 23: 2980-2987; doi:10.1093/nar/23.15.2980 [Abstract] [Print PDF] [Request Permissions]

James C. Engert, Sabah Servaes, Pramod Sutrave, Stephen H. Hughes, and A. Rosenthal: Activation of a muscle-specific enhancer by the Ski proto-oncogene
Nucl. Acids Res. 1995 23: 2988-2994; doi:10.1093/nar/23.15.2988 [Abstract] [Print PDF] [Request Permissions]

Clelia R. A. Bertoncini and Rogerio Mene: DNA strand breaks produced by oxidative stress in mammalian cells exhibit 3'-phosphoglycolate termini
Nucl. Acids Res. 1995 23: 2995-3002; doi:10.1093/nar/23.15.2995 [Abstract] [Print PDF] [Request Permissions]

imothy A. Vickers, Michael C. Griffith, Kanda Ramasamy, Lisa M. Risen, and Susan M. Freier: Inhibition of NF- ${kappa}$ B specific transcriptional activation by PNA strand invasion
Nucl. Acids Res. 1995 23: 3003-3008; doi:10.1093/nar/23.15.3003 [Abstract] [Print PDF] [Request Permissions]

Ramachandran Ramalingam, John E. Blume, Kalyan Ganguly, and Herbert L. Ennis: AT-rich upstream sequence elements regulate spore germination-specific expression of the Dictyostelium discoideum celA gene
Nucl. Acids Res. 1995 23: 3018-3025; doi:10.1093/nar/23.15.3018 [Abstract] [Print PDF] [Request Permissions]

Xian-Yang Zhang, Yi-Sheng Ni, Zubaida Saifudeen, Clement K. Asiedu, rakash C. Supakar, and Melanie Ehrlich: Increasing binding of a transcription factor immediately downstream of the cap site of a cytomegalovirus gene represses expression
Nucl. Acids Res. 1995 23: 3026-3033; doi:10.1093/nar/23.15.3026 [Abstract] [Print PDF] [Request Permissions]

Kyung Chin, Naoko Oda, Kun Shen, and Constance Tom Noguchi: Regulation of transcription of the human erythropoietin receptor gene by proteins binding to GATA–1 and Sp1 motifs
Nucl. Acids Res. 1995 23: 3041-3049; doi:10.1093/nar/23.15.3041 [Abstract] [Print PDF] [Request Permissions]

RNA:

John R. Lorsch, David P. Bartel, and Jack W. Szostak: Reverse transcriptase reads through a 2'–5' linkage and a 2'-thiphosphate in a template
Nucl. Acids Res. 1995 23: 2811-2814; doi:10.1093/nar/23.15.2811 [Abstract] [Print PDF] [Request Permissions]

Nobukazu Nameki: Identity elements of tRNA^Thr towards saccharomyces cerevisiae threonyl-tRNA synthetase
Nucl. Acids Res. 1995 23: 2831-2836; doi:10.1093/nar/23.15.2831 [Abstract] [Print PDF] [Request Permissions]

Lun Quan sun, Li Wang, Wayne L. Gerlach, and Geoff Symonds: Target sequence-specific inhibition of Hiv- replication by ribozymes directed to tatRNA
Nucl. Acids Res. 1995 23: 2909-2913; doi:10.1093/nar/23.15.2909 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

Thuong Vo, Shaouhui Wang, and Erich T. Kool: Targeting pyrimidine single strands by triplex formation: structural optimization of binding
Nucl. Acids Res. 1995 23: 2937-2944; doi:10.1093/nar/23.15.2937 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Tien-An Yang, William C. Heiser, and John M. Sedivy: Efficient in situ electroporation of mammalian cells grown on microporous membranes
Nucl. Acids Res. 1995 23: 2803-2810; doi:10.1093/nar/23.15.2803 [Abstract] [Print PDF] [Request Permissions]

Mary E. Hawkins, Wolfgang Pfieiderer, Abhijit Mazumder, Yves G. Pommier, and Frank M. Balis: Incorporation of a fluorescent guanosine analog into olignoucleotides and its application to a real time assay for the HIV-1 integrase 3'-Processing reaction
Nucl. Acids Res. 1995 23: 2872-2880; doi:10.1093/nar/23.15.2872 [Abstract] [Print PDF] [Request Permissions]

Alexander D. Beskin, Dina Zevin-Sonkin, Irina A. Sobolev, and Levy E. Ulanovsky: On the mechanism of the modular primer effect
Nucl. Acids Res. 1995 23: 2881-2885; doi:10.1093/nar/23.15.2881 [Abstract] [Print PDF] [Request Permissions]

Adrian J. Lloyd, Hans-Ulrich Thomann, Michael Ibba, and Dieter Soöll: A broadly applicable continuous spectrophotometric assay for measuring aminoacyl-tRNA synthetase activity
Nucl. Acids Res. 1995 23: 2886-2892; doi:10.1093/nar/23.15.2886 [Abstract] [Print PDF] [Request Permissions]

Natalia B. Ivanova and Alexander V. Belyavsky: Identification of differentialy expressed genes by restirction endonuclease-based gene expression fingerprinting
Nucl. Acids Res. 1995 23: 2954-2958; doi:10.1093/nar/23.15.2954 [Abstract] [Print PDF] [Request Permissions]

Manuel Engelhorn, Freédeéric Boccard, Christine Murtin, Pierre Prentki, and Johannes Geiselmann: In vivo interaction of the Excherichia coli integration host factor with its specific binding sites
Nucl. Acids Res. 1995 23: 2959-2965; doi:10.1093/nar/23.15.2959 [Abstract] [Print PDF] [Request Permissions]

Daniel B. Demers, Elizabeth T. Curry, Michael Egholm, and Amanda C. Sozer: Enhanced PCR amplification of VNTR locus D1S80 using peptide nucleic acid (PNA)
Nucl. Acids Res. 1995 23: 3050-3055; doi:10.1093/nar/23.15.3050 [Abstract] [Print PDF] [Request Permissions]

Danièle Beadudry and Jean-Pierro Perreault: An efficient strategy for the synthesis of circular RNA molecules
Nucl. Acids Res. 1995 23: 3064-3066; doi:10.1093/nar/23.15.3064 [Print PDF] [Request Permissions]

Ian A. J. Lorimer and Ira Pastan: Random recombination of antibody single chain Fv sequences after fragmentation with DNasel in the presence of Mn²⁺
Nucl. Acids Res. 1995 23: 3067-3068; doi:10.1093/nar/23.15.3067 [Print PDF] [Request Permissions]

Adriana Ravagnani and Herbert N. Arst, Jr: Quantitation of oligohistidine fusion proteins using ⁶³Ni₂₊ chelation
Nucl. Acids Res. 1995 23: 3069-3070; doi:10.1093/nar/23.15.3069 [Print PDF] [Request Permissions]

Yi-Hai Jiang, Laurie A. Davidson, Joanne R. Lupton, and Robert S. Chapkin: A rapid RT-PCR method for detection of intact RNA in formalin-fixed paraffin-embedded tissues
Nucl. Acids Res. 1995 23: 3071-3072; doi:10.1093/nar/23.15.3071 [Print PDF] [Request Permissions]

S. E. Latham and B. Kalionis: A reliable method for retrieving plasmid DNA from tissue culture cells
Nucl. Acids Res. 1995 23: 3073; doi:10.1093/nar/23.15.3073 [Print PDF] [Request Permissions]

Sean L. Johnston, Michael Strausbauch, Gobinda Sarkar, and Peter J. Wettstein: A novel method for sequencing members of multi-gene families
Nucl. Acids Res. 1995 23: 3074-3075; doi:10.1093/nar/23.15.3074 [Print PDF] [Request Permissions]

Rabindra N. Roy, Suman Mukhopadhyay, Linda I. C. Wei, and Herb E. Schellhorn: Isolation and sequencing of gene fusions carried by ${lambda}$ placMu specialized transducing phage
Nucl. Acids Res. 1995 23: 3076-3078; doi:10.1093/nar/23.15.3076 [Print PDF] [Request Permissions]

Francoise Längle-Rouault and Eric Jacobs: A method for performing precise alterations in the yeast genome using a recyclable selectable marker
Nucl. Acids Res. 1995 23: 3079-3081; doi:10.1093/nar/23.15.3079 [Print PDF] [Request Permissions]

Author index:

: Author index
Nucl. Acids Res. 1995 23: 3082; doi:10.1093/nar/23.15.3082-b [Print PDF] [Request Permissions]

ENZYMOLOGY:

F. Focher, G. Maga, A. Bendiscioli, M. Capobianco, F. Colonna, A. Garbesi, and S. Spadari: Stereospecificity of human DNA polymerases ${alpha}$ ,ß, ${gamma}$ , $§$ and ${varepsilon}$ , HIV-reverse transcriptase, HSV- DNA polymerase, calf thymus terminal transferase and Escherichia coli DNA polymerase I in recognizing D- and L-thymidine 5'-triphosphate as substrate
Nucl. Acids Res. 1995 23: 2840-2847; doi:10.1093/nar/23.15.2840 [Abstract] [Print PDF] [Request Permissions]

Abhijit Mazumder and Yves Pommier: Processing of deoxyuridine mismatches and abasic sites by human immunodeficiency virus type- integrase
Nucl. Acids Res. 1995 23: 2865-2871; doi:10.1093/nar/23.15.2865 [Abstract] [Print PDF] [Request Permissions]

Alex B. Burgin, Jr, Beth N. Huizenga, and Howard A. Nash: A novel suicide substrate for DNA topoisomerases and site-specific recombinases
Nucl. Acids Res. 1995 23: 2973-2979; doi:10.1093/nar/23.15.2973 [Abstract] [Print PDF] [Request Permissions]

GENOME STRUCTURE AND MAPPING:

Antonio Di Cristofano, Maria Strazzullo, Letizia Longo, and Girolama La Mantia: Characterization and genomic mapping of the ZNF80 locus: expression of this zinc-finger gene is driven by a solitary LTR of ERV9 endogenous retrovrial family
Nucl. Acids Res. 1995 23: 2823-2830; doi:10.1093/nar/23.15.2823 [Abstract] [Print PDF] [Request Permissions]

John P. Murnane and Jose F. Morales: Use of a mammalian interspersed repetitive (MIR) element in the coding and processing sequences of mammalian genes
Nucl. Acids Res. 1995 23: 2837-2839; doi:10.1093/nar/23.15.2837 [Abstract] [Print PDF] [Request Permissions]

Asuncioón Olmo, Roasalia Arrebola, Victor Bernie, Dolores González-Pacanowska, and Luis M. Ruiz-Pérez: Co-existence of circular and multiple linear amplicons in methotrexate-resistant Leishmania
Nucl. Acids Res. 1995 23: 2856-2864; doi:10.1093/nar/23.15.2856 [Abstract] [Print PDF] [Request Permissions]

Isabell Niemer, Carlo Schmelzer, and G. Valentin Boörner: Overexpression of DEAD box protein pMSS116 promotes ATP-dependent splicing of a yeast group II intron in vitro
Nucl. Acids Res. 1995 23: 2966-2972; doi:10.1093/nar/23.15.2966 [Abstract] [Print PDF] [Request Permissions]

Fengzhu Sun, Norman Arnheim, and Michael S. Waterman: Whole genome amplification of single cells: mathematical analysis of PEP and tagged PCR
Nucl. Acids Res. 1995 23: 3034-3040; doi:10.1093/nar/23.15.3034 [Abstract] [Print PDF] [Request Permissions]

Marco Molinaro and Ignacio Tinoco, Jr: Use of ultra stable UNCG tetraloop hairpins to fold RNA structures: thermodynamic and spectroscopic applications
Nucl. Acids Res. 1995 23: 3056-3063; doi:10.1093/nar/23.15.3056 [Abstract] [Print PDF] [Request Permissions]

STRUCTURAL BIOLOGY:

Amy S. Kimball, Melissa L. Kimball, Makkuni Jayaram, and Thomas D. Tullius: Chemical probe and missing nucleoside analysis of Flp recombinase bound to the recombination target sequence
Nucl. Acids Res. 1995 23: 3009-3017; doi:10.1093/nar/23.15.3009 [Abstract] [Print PDF] [Request Permissions]

Nucleic Acids Research