Nucl. Acids Res. -- Table of Contents (23 [3, February 11 1995])

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Contents: Volume 23, Number 3    11 February 1995    [Index by Author]

       COMPUTATIONAL BIOLOGY

       MOLECULAR BIOLOGY

       RNA

       CHEMISTRY

       METHODS

       Errata

       Author index

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Front Matter (Print PDF)

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COMPUTATIONAL BIOLOGY:

Hiroyuki Ogata, Yutaka Akiyama, and Minoru Kanehisa: A genetic algorithm based molecular modeling technique for RNA stem-loop structures
Nucl. Acids Res. 1995 23: 419-426; doi:10.1093/nar/23.3.419 [Abstract] [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

Ayyappan K. Rajasekaran, Zhongmin Zhou, Kulkarni Prakash, Gokul Das, and Gert Kreibich: Functional characterization of the cis-regulatory elements of the rat ribophorin I gene
Nucl. Acids Res. 1995 23: 313-319; doi:10.1093/nar/23.3.313 [Abstract] [Print PDF] [Request Permissions]

Irmgard Wiesenberg, Martin Missbach, Jean-Pierre Kahlen, Magdalena Schräder, and Carsten Carlberg: Transcriptional activation of the nuclear receptor RZR ${alpha}$ by the pineal gland hormone melatonin and identification of CGP 52608 as a synthetic ligand
Nucl. Acids Res. 1995 23: 327-333; doi:10.1093/nar/23.3.327 [Abstract] [Print PDF] [Request Permissions]

Wendy Cannon, Sara Austin, Madeleine Moore, and Martin Buck: Identification of close contacts between the ${sigma}$ ^N ( ${sigma}$ ⁵⁴) protein and promoter DNA in closed promoter complexes
Nucl. Acids Res. 1995 23: 351-356; doi:10.1093/nar/23.3.351 [Abstract] [Print PDF] [Request Permissions]

Takeo Shobuike, Shoji Sugano, Teruhito Yamashita, and Hideo Ikeda: Characterization of cDNA encoding mouse homolog of fission yeast dhp1⁺ gene: structural and functional conservation
Nucl. Acids Res. 1995 23: 357-361; doi:10.1093/nar/23.3.357 [Abstract] [Print PDF] [Request Permissions]

Georgy Bakalkin, Galina Selivanova, Tatjana Yakovleva, Elena Kiseleva, Elena Kashuba, Kristinn P. Magnusson, Laszlo Szekely, George Klein, Lars Terenius, and Klas G. Wiman: p53 binds single-stranded DNA ends through the C-terminal domain and internal DNA segments via the middle domain
Nucl. Acids Res. 1995 23: 362-369; doi:10.1093/nar/23.3.362 [Abstract] [Print PDF] [Request Permissions]

Cohn J. Ingham, Iain S. Hunter, and Margaret C. M. Smith: Rho-independent terminators without 3' poly-U tails from the early region of actinophage øC31
Nucl. Acids Res. 1995 23: 370-376; doi:10.1093/nar/23.3.370 [Abstract] [Print PDF] [Request Permissions]

Manoochehr Tavassoll, Maryam Shayeghl, Anwar Nasim, and Felicity Z. Watts: Cloning and characterisation of the Schizosaccharomyces pombe rad32 gene: a gene required for repair of double strand breaks and recombination
Nucl. Acids Res. 1995 23: 383-388; doi:10.1093/nar/23.3.383 [Abstract] [Print PDF] [Request Permissions]

Philippe Rouet, Gilda Raguenez, Francois Tranche, Virginie Mfou'ou, and Jean-Philippe Salier: Hierarchy and positive/negative interplays of the hepatocyte nuclear factors HNF-1, -3 and -4 in the liver-specific enhancer for the human ${alpha}$ -1-microglobulin/bikunin precursor
Nucl. Acids Res. 1995 23: 395-404; doi:10.1093/nar/23.3.395 [Abstract] [Print PDF] [Request Permissions]

Dmitry V. Kuprash, Nancy R. Rice, and Sergei A. Nedospasov: Homodimer of p50 (NF ${kappa}$ B1) does not introduce a substantial directed bend into DNA according to three different experimental assays
Nucl. Acids Res. 1995 23: 427-433; doi:10.1093/nar/23.3.427 [Abstract] [Print PDF] [Request Permissions]

Maqsood A. Chotani, Robert A. Payson, Jeffrey A. Winkles, and Ing-Ming Chiu: Human fibroblast growth factor 1 gene expression in vascular smooth muscle cells is modulated via an alternate promoter in response to serum and phorbol ester
Nucl. Acids Res. 1995 23: 434-441; doi:10.1093/nar/23.3.434 [Abstract] [Print PDF] [Request Permissions]

Christina M. Sax, Ales Cvekl, Marc Kantorow, Rashmi Gopal-Srivastava, John G. Ilagan, Nicholas P. Ambulos, Jr., and Joram Piatigorsky: Lens-specific activity of the mouse ${alpha}$ A-crystallin promoter in the absence of a TATA box: functional and protein binding analysis of the mouse ( ${alpha}$ A-crystallin PE1 region
Nucl. Acids Res. 1995 23: 442-451; doi:10.1093/nar/23.3.442 [Abstract] [Print PDF] [Request Permissions]

Ryoiti Kiyama and Michio Oishi: Protection of DNA sequences by triplex-bridge formation
Nucl. Acids Res. 1995 23: 452-458; doi:10.1093/nar/23.3.452 [Abstract] [Print PDF] [Request Permissions]

Riqiang Yan, Sajjad Qureshi, Zhong Zhong, Zilong Wen, and James E. Darnell, Jr.: The genomic structure of the STAT genes: multiple exons in coincident sites in Stat1 and Stat2
Nucl. Acids Res. 1995 23: 459-463; doi:10.1093/nar/23.3.459 [Abstract] [Print PDF] [Request Permissions]

Maria Teresa Fiorenza, Thomas Farkas, Marianne Dissing, Dorthe Kolding, and Vincenzo Zimarino: Complex expression of murine heat shock transcription factors
Nucl. Acids Res. 1995 23: 467-474; doi:10.1093/nar/23.3.467 [Abstract] [Print PDF] [Request Permissions]

Gregory S. Naeve, Yanhong Zhou, and Amy S. Lee: Identification of a 68 kDa protein species as a specific DNA-binding component of the H3abp complex interacting with the histone H3.2 G1/S regulatory domain
Nucl. Acids Res. 1995 23: 475-484; doi:10.1093/nar/23.3.475 [Abstract] [Print PDF] [Request Permissions]

Scott L. Medberry, Emily Dale, Minmin Qin, and David W. Ow: Intra-chromosomal rearrangements generated by Cre-lox site-specific recombination
Nucl. Acids Res. 1995 23: 485-490; doi:10.1093/nar/23.3.485 [Abstract] [Print PDF] [Request Permissions]

RNA:

Stefan Teigelkamp, Erica Whittaker, and Jean D. Beggs: Interaction of the yeast splicing factor PRP8 with substrate RNA during both steps of splicing
Nucl. Acids Res. 1995 23: 320-326; doi:10.1093/nar/23.3.320 [Abstract] [Print PDF] [Request Permissions]

Theophile Ohimann, Michael Rau, Simon J. Morley, and Virginia M. Pain: Proteolytic cleavage of initiation factor elF-4 ${gamma}$ in the reticulocyte lysate inhibits translation of capped mRNAs but enhances that of uncapped mRNAs
Nucl. Acids Res. 1995 23: 334-340; doi:10.1093/nar/23.3.334 [Abstract] [Print PDF] [Request Permissions]

Frédéric H.-T. Allain and Gabriele Varani: Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns
Nucl. Acids Res. 1995 23: 341-350; doi:10.1093/nar/23.3.341 [Abstract] [Print PDF] [Request Permissions]

Taian Cui and Alan G. Porter: Localization of binding site for encephalomyocarditis virus RNA polymerase in the 3'-noncoding region of the viral RNA
Nucl. Acids Res. 1995 23: 377-382; doi:10.1093/nar/23.3.377 [Abstract] [Print PDF] [Request Permissions]

Nobukazu Nameki, Haruichi Asahara, Mikio Shimizu, Norihiro Okada, and Hyouta Himeno: Identity elements of Saccharomyces cerevisiae tRNA^His
Nucl. Acids Res. 1995 23: 389-394; doi:10.1093/nar/23.3.389 [Abstract] [Print PDF] [Request Permissions]

N. Gunkel, M. Braddock, A.M. Thorburn, M. Muckenthaler, A.J. Kingsman, and S.M. Kingsman: Promoter control of translation in Xenopus oocytes
Nucl. Acids Res. 1995 23: 405-412; doi:10.1093/nar/23.3.405 [Abstract] [Print PDF] [Request Permissions]

Wilfried Kugler, Jürg Enssle, Matthias W. Hentze, and Andreas E. Kulozik: Nuclear degradation of nonsense mutated ß-globin mRNA: a post-transcriptional mechanism to protect heterozygotes from severe clinical manifestations of ß-thalassemia?
Nucl. Acids Res. 1995 23: 413-418; doi:10.1093/nar/23.3.413 [Abstract] [Print PDF] [Request Permissions]

Urban Johanson and Diarmaid Hughes: A new mutation in 16S rRNA of Escherichia coli conferring spectinomycin resistance
Nucl. Acids Res. 1995 23: 464-466; doi:10.1093/nar/23.3.464 [Abstract] [Print PDF] [Request Permissions]

Andrea D. Branch, Bonnie J. Levine, and Jana A. Polaskova: An RNA tertiary structure of the hepatitis delta agent contains UV-sensitive bases U-712 and U-865 and can form in a bimolecular complex
Nucl. Acids Res. 1995 23: 491-499; doi:10.1093/nar/23.3.491 [Abstract] [Print PDF] [Request Permissions]

Claudia D. McDonald and L. James Maher, III: Recognition of duplex DNA by RNA polynucleotides
Nucl. Acids Res. 1995 23: 500-506; doi:10.1093/nar/23.3.500 [Abstract] [Print PDF] [Request Permissions]

Christopher J. Davies and Clyde A. Hutchison, III: Insertion site specificity of the transposon Tn3
Nucl. Acids Res. 1995 23: 507-514; doi:10.1093/nar/23.3.507 [Abstract] [Print PDF] [Request Permissions]

CHEMISTRY:

Karol Miaskiewicz, John H. Miller, and Alfred F. Fuciarelli: Theoretical analysis of DNA intrastrand cross linking by formation of 8,5'-cyclodeoxyadenosine
Nucl. Acids Res. 1995 23: 515-521; doi:10.1093/nar/23.3.515 [Abstract] [Print PDF] [Request Permissions]

Andrzej Wilk and Wojciech Stec: Analysis of oligo(deoxynucleoside phosphorothioate)s and their diastereomeric composition
Nucl. Acids Res. 1995 23: 530-534; doi:10.1093/nar/23.3.530 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Edwin R. Hendrickson, Tina M. Hatfield Truby, Rolf D. Joerger, William R. Majarian, and Richard C. Ebersole: High sensitivity multianalyte immunoassay using covalent DNA-labeled antibodies and polymerase chain reaction
Nucl. Acids Res. 1995 23: 522-529; doi:10.1093/nar/23.3.522 [Abstract] [Print PDF] [Request Permissions]

Isabelle Jupin and Bruno Gronenborn: Abundant, easy and reproducible production of single-stranded DNA from phagemids using helper phage-infected competent cells
Nucl. Acids Res. 1995 23: 535-536; doi:10.1093/nar/23.3.535 [Print PDF] [Request Permissions]

Isabelle Jupin, Nektarios Tavernarakis, and George Thireos: A recombinatorial method useful for cloning dominant alleles in Saccharomyces cerevisiae
Nucl. Acids Res. 1995 23: 537-538; doi:10.1093/nar/23.3.537 [Print PDF] [Request Permissions]

K. Woodford, M.N. Weitzmann, and K. Usdin: The use of K⁺-free buffers eliminates a common cause of premature chain termination in PCR and PCR sequencing
Nucl. Acids Res. 1995 23: 539; doi:10.1093/nar/23.3.539 [Print PDF] [Request Permissions]

Errata:

Madelaine Toutant, Cécile Gauthier-Rouviere, Marc Y. Fiszman, and Marguerite Lemonnier: Promoter elements and transcription control of the chiken tropomyosin gene
Nucl. Acids Res. 1995 23: 540; doi:10.1093/nar/23.3.540 [Abstract] [Print PDF] [Request Permissions]

David Mu, Elisabeth Bertrand-Burggraf, Juch-Chin Huang, Robert P.P. Fuchs, and Aziz Sancar: Human and E.Coli excinucleases are affected differently by the sequence context of acetylaminofluorene-guanine adduct
Nucl. Acids Res. 1995 23: 540; doi:10.1093/nar/23.3.540-a [Abstract] [Print PDF] [Request Permissions]

Jeff Rogers and Julian Davies: The pseudodisaccharides: a novel class of group I intron splicing inhibitors
Nucl. Acids Res. 1995 23: 540; doi:10.1093/nar/23.3.540-b [Abstract] [Print PDF] [Request Permissions]

Author index:

: Author index
Nucl. Acids Res. 1995 23: 540; doi:10.1093/nar/23.3.540-c [Print PDF] [Request Permissions]

Online ISSN 1362-4962 - Print ISSN 0305-1048

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