Nucleic Acids Research

Articles:

TR Burglin

Analysis of TALE superclass homeobox genes (MEIS, PBC, KNOX, Iroquois, TGIF) reveals a novel domain conserved between plants and animals
Nucl. Acids Res. 1997 25: 4173-4180; doi:10.1093/nar/25.21.4173 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

J Wu and LF Liu

Processing of topoisomerase I cleavable complexes into DNA damage by transcription
Nucl. Acids Res. 1997 25: 4181-4186; doi:10.1093/nar/25.21.4181 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

KG Rajeev, VR Jadhav, and KN Ganesh

Triplex formation at physiological pH: comparative studies on DNA triplexes containing 5-Me-dC tethered at N4 with spermine and tetraethyleneoxyamine
Nucl. Acids Res. 1997 25: 4187-4193; doi:10.1093/nar/25.21.4187 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

V Junker, T Teichmann, A Hekele, C Fingerhut, and H Beier

The tRNATyr-isoacceptors and their genes in the ciliate Tetrahymena thermophila: cytoplasmic tRNATyr has a QPsiA anticodon and is coded by multiple intron-containing genes
Nucl. Acids Res. 1997 25: 4194-4200; doi:10.1093/nar/25.21.4194 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

J Klovins, J van Duin, and RCL Olsthoorn

Rescue of the RNA phage genome from RNase III cleavage
Nucl. Acids Res. 1997 25: 4201-4208; doi:10.1093/nar/25.21.4201 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

DM Dykxhoorn, R St Pierre, O Van Ham, and T Linn

An efficient protocol for linker scanning mutagenesis: analysis of the translational regulation of an Escherichia coli RNA polymerase subunit gene
Nucl. Acids Res. 1997 25: 4209-4218; doi:10.1093/nar/25.21.4209 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

D Froim, CE Hopkins, A Belenky, and AS Cohen

Method for phosphorothioate antisense DNA sequencing by capillary electrophoresis with UV detection
Nucl. Acids Res. 1997 25: 4219-4223; doi:10.1093/nar/25.21.4219 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

PJ Artymiuk, TA Ceska, D Suck, and JR Sayers

Prokaryotic 5'-3' exonucleases share a common core structure with gamma- delta resolvase
Nucl. Acids Res. 1997 25: 4224-4229; doi:10.1093/nar/25.21.4224 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

L Wu and F Winston

Evidence that Snf-Swi controls chromatin structure over both the TATA and UAS regions of the SUC2 promoter in Saccharomyces cerevisiae
Nucl. Acids Res. 1997 25: 4230-4234; doi:10.1093/nar/25.21.4230 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

D Batten, KD Dyer, JB Domachowske, and HF Rosenberg

Molecular cloning of four novel murine ribonuclease genes: unusual expansion within the ribonuclease A gene family
Nucl. Acids Res. 1997 25: 4235-4239; doi:10.1093/nar/25.21.4235 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

KH Luetke, BP Zhao, and PD Sadowski

Asymmetry in Flp-mediated cleavage
Nucl. Acids Res. 1997 25: 4240-4249; doi:10.1093/nar/25.21.4240 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Wiltshire, S Raychaudhuri, and S Eisenberg

An Abf1p C-terminal region lacking transcriptional activation potential stimulates a yeast origin of replication
Nucl. Acids Res. 1997 25: 4250-4256; doi:10.1093/nar/25.21.4250 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

MS Reagan and EC Friedberg

Recovery of RNA polymerase II synthesis following DNA damage in mutants of Saccharomyces cerevisiae defective in nucleotide excision repair
Nucl. Acids Res. 1997 25: 4257-4263; doi:10.1093/nar/25.21.4257 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Kukreti, JS Sun, T Garestier, and C Helene

Extension of the range of DNA sequences available for triple helix formation: stabilization of mismatched triplexes by acridine-containing oligonucleotides
Nucl. Acids Res. 1997 25: 4264-4270; doi:10.1093/nar/25.21.4264 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

RM Marion, T Aragon, A Beloso, A Nieto, and J Ortin

The N-terminal half of the influenza virus NS1 protein is sufficient for nuclear retention of mRNA and enhancement of viral mRNA translation
Nucl. Acids Res. 1997 25: 4271-4277; doi:10.1093/nar/25.21.4271 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

B Papadopoulou and C Dumas

Parameters controlling the rate of gene targeting frequency in the protozoan parasite Leishmania
Nucl. Acids Res. 1997 25: 4278-4286; doi:10.1093/nar/25.21.4278 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

JM Andreoli, SI Jang, E Chung, CM Coticchia, PM Steinert, and NG Markova

The expression of a novel, epithelium-specific ets transcription factor is restricted to the most differentiated layers in the epidermis
Nucl. Acids Res. 1997 25: 4287-4295; doi:10.1093/nar/25.21.4287 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

ML Hastings, C Milcarek, K Martincic, ML Peterson, and SH Munroe

Expression of the thyroid hormone receptor gene, erbAalpha, in B lymphocytes: alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels
Nucl. Acids Res. 1997 25: 4296-4300; doi:10.1093/nar/25.21.4296 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Zhang, M Stancek, and LA Isaksson

The efficiency of a cis-cleaving ribozyme in an mRNA coding region is influenced by the translating ribosome in vivo
Nucl. Acids Res. 1997 25: 4301-4306; doi:10.1093/nar/25.21.4301 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

JP Kahlen and C Carlberg

Allosteric interaction of the 1alpha,25-dihydroxyvitamin D3 receptor and the retinoid X receptor on DNA
Nucl. Acids Res. 1997 25: 4307-4313; doi:10.1093/nar/25.21.4307 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

MT Discenza, M Dehbi, and J Pelletier

Overlapping DNA recognition motifs between Sp1 and a novel trans-acting factor within the wt1 tumour suppressor gene promoter
Nucl. Acids Res. 1997 25: 4314-4322; doi:10.1093/nar/25.21.4314 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

KU Wagner, RJ Wall, L St-Onge, P Gruss, A Wynshaw-Boris, L Garrett, M Li, PA Furth, and L Hennighausen

Cre-mediated gene deletion in the mammary gland
Nucl. Acids Res. 1997 25: 4323-4330; doi:10.1093/nar/25.21.4323 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NF Lue and Y Peng

Identification and characterization of a telomerase activity from Schizosaccharomyces pombe
Nucl. Acids Res. 1997 25: 4331-4337; doi:10.1093/nar/25.21.4331 [Abstract] [FREE Full Text] [Request Permissions]  

DK Lee, KC Wang, and RG Roeder

Functional significance of the TATA element major groove in transcription initiation by RNA polymerase II
Nucl. Acids Res. 1997 25: 4338-4345; doi:10.1093/nar/25.21.4338 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

R Pine

Convergence of TNFalpha and IFNgamma signalling pathways through synergistic induction of IRF-1/ISGF-2 is mediated by a composite GAS/kappaB promoter element
Nucl. Acids Res. 1997 25: 4346-4354; doi:10.1093/nar/25.21.4346 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

L Wang and DE Ruffner

An ultraviolet crosslink in the hammerhead ribozyme dependent on 2- thiocytidine or 4-thiouridine substitution
Nucl. Acids Res. 1997 25: 4355-4361; doi:10.1093/nar/25.21.4355 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

WJ Driggers, GP Holmquist, SP LeDoux, and GL Wilson

Mapping frequencies of endogenous oxidative damage and the kinetic response to oxidative stress in a region of rat mtDNA
Nucl. Acids Res. 1997 25: 4362-4369; doi:10.1093/nar/25.21.4362 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

QM Eastman and DG Schatz

Nicking is asynchronous and stimulated by synapsis in 12/23 rule- regulated V(D)J cleavage
Nucl. Acids Res. 1997 25: 4370-4378; doi:10.1093/nar/25.21.4370 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

M Argaman, R Golan, NH Thomson, and HG Hansma

Phase imaging of moving DNA molecules and DNA molecules replicated in the atomic force microscope
Nucl. Acids Res. 1997 25: 4379-4384; doi:10.1093/nar/25.21.4379 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Hattman and W Sun

Escherichia coli OxyR modulation of bacteriophage Mu mom expression in dam+ cells can be attributed to its ability to bind hemimethylated Pmom promoter DNA
Nucl. Acids Res. 1997 25: 4385-4388; doi:10.1093/nar/25.21.4385 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

MA Keniry, EA Owen, and RH Shafer

The contribution of thymine-thymine interactions to the stability of folded dimeric quadruplexes
Nucl. Acids Res. 1997 25: 4389-4392; doi:10.1093/nar/25.21.4389 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

EG Malygin, NA Petrov, YA Gorbunov, VG Kossykh, and S Hattman

Interaction of the phage T4 Dam DNA-[N6-adenine] methyltransferase with oligonucleotides containing native or modified (defective) recognition sites
Nucl. Acids Res. 1997 25: 4393-4399; doi:10.1093/nar/25.21.4393 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

LG Guy, R Kothary, and L Wall

Position effects in mice carrying a lacZ transgene in cis with the beta- globin LCR can be explained by a graded model
Nucl. Acids Res. 1997 25: 4400-4407; doi:10.1093/nar/25.21.4400 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

TD Schneider

Sequence walkers: a graphical method to display how binding proteins interact with DNA or RNA sequences [published erratum appears in Nucleic Acids Res 1998 Feb 15;26(4):following 1134]
Nucl. Acids Res. 1997 25: 4408-4415; doi:10.1093/nar/25.21.4408 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

M Chen, ST Compton, VF Coviello, ED Green, and MA Ashlock

Transient gene expression from yeast artificial chromosome DNA in mammalian cells is enhanced by adenovirus
Nucl. Acids Res. 1997 25: 4416-4418; doi:10.1093/nar/25.21.4416 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

PJM Valk, M Joosten, Y Vankan, B Lowenberg, and R Delwel

A rapid RT-PCR based method to isolate complementary DNA fragments flanking retrovirus integration sites
Nucl. Acids Res. 1997 25: 4419-4421; doi:10.1093/nar/25.21.4419 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

PM Warnecke, C Stirzaker, JR Melki, DS Millar, CL Paul, and SJ Clark

Detection and measurement of PCR bias in quantitative methylation analysis of bisulphite-treated DNA
Nucl. Acids Res. 1997 25: 4422-4426; doi:10.1093/nar/25.21.4422 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

CT Lin and DR Sargan

A method for generating subtractive cDNA libraries retaining clones containing repetitive elements
Nucl. Acids Res. 1997 25: 4427-4428; doi:10.1093/nar/25.21.4427 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Corrigenda:

C.L. Clark, P.K. Cecil, D. Singh, and D.M. Gray

CD, absorption and thermodynamic analysis of repeating dinucleotide DNA, RNA and hybrid duplexes [d/r(AC)]₁₂·[d/r(GT/U)]₁₂ and the influence of phosphorothioate substitution
Nucl. Acids Res. 2004 25: 0; doi:10.1093/nar/25.21.0 [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

I. Hayashi, G. Kawai, and K. Watanabe

Expression of bovine mitochondrial tRNA^Ser_GCU derivatives in Escherichia coli
Nucl. Acids Res. 2004 25: 0; doi:10.1093/nar/25.21.0-a [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

C. Barlow, M. Schroeder, J. Lekstrom-Himes, H. Kylefjord, C.-X. Deng, A. Wynshaw-Boris, B.M. Spiegelman, and K.G. Xanthopoulos

Targeted expression of Cre recombinase to adipose tissue of transgenic mice directs adipose-specific excision of loxP-flanked gene segments
Nucl. Acids Res. 2004 25: 0; doi:10.1093/nar/25.21.0-b [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

Errata:

B.S. Singer, T. Shtatland, D. Brown, and L. Gold

Libraries for genomic SELEX
Nucl. Acids Res. 2004 25: 0; doi:10.1093/nar/25.21.0-c [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

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