Nucleic Acids Research

Reviews:

MW Gray, BF Lang, R Cedergren, GB Golding, C Lemieux, D Sankoff, M Turmel, N Brossard, E Delage, TG Littlejohn, I Plante, P Rioux, D Saint-Louis, Y Zhu, and G Burger

Genome structure and gene content in protist mitochondrial DNAs
Nucl. Acids Res. 1998 26: 865-878. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Articles:

B Ward and T Juehne

Combinatorial library diversity: probability assessment of library populations
Nucl. Acids Res. 1998 26: 879-886. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

KM Choi and R Brimacombe

The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; a comparative cross-linking study with three different peptide families
Nucl. Acids Res. 1998 26: 887-895. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Z Liu, M Reches, I Groisman, and H Engelberg-Kulka

The nature of the minimal 'selenocysteine insertion sequence' (SECIS) in Escherichia coli
Nucl. Acids Res. 1998 26: 896-902. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

T Mikawa, R Kato, M Sugahara, and S Kuramitsu

Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermus thermophilus HB8 [published erratum appears in Nucleic Acids Res 1998 Apr 1;26(7):following 1855]
Nucl. Acids Res. 1998 26: 903-910. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

M Sugai, S Kondo, A Shimizu, and T Honjo

Isolation of differentially expressed genes upon immunoglobulin class switching by a subtractive hybridization method using uracil DNA glycosylase
Nucl. Acids Res. 1998 26: 911-918. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

A Law, K Hirayoshi, T O'Brien, and JT Lis

Direct cloning of DNA that interacts in vivo with a specific protein: application to RNA polymerase II and sites of pausing in Drosophila
Nucl. Acids Res. 1998 26: 919-924. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

SA Akbar Behjatnia, IB Dry, and M Ali Rezaian

Identification of the replication-associated protein binding domain within the intergenic region of tomato leaf curl geminivirus
Nucl. Acids Res. 1998 26: 925-931. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

L Harrison, Z Hatahet, AA Purmal, and SS Wallace

Multiply damaged sites in DNA: interactions with Escherichia coli endonucleases III and VIII
Nucl. Acids Res. 1998 26: 932-941. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

G Belli, E Gari, L Piedrafita, M Aldea, and E Herrero

An activator/repressor dual system allows tight tetracycline-regulated gene expression in budding yeast [published erratum appears in Nucleic Acids Res 1998 Apr 1;26(7):following 1855]
Nucl. Acids Res. 1998 26: 942-947. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

K Drotschmann, A Aronshtam, HJ Fritz, and MG Marinus

The Escherichia coli MutL protein stimulates binding of Vsr and MutS to heteroduplex DNA
Nucl. Acids Res. 1998 26: 948-953. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

ES Poole, LL Major, SA Mannering, and WP Tate

Translational termination in Escherichia coli: three bases following the stop codon crosslink to release factor 2 and affect the decoding efficiency of UGA-containing signals
Nucl. Acids Res. 1998 26: 954-960. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

J Stewart, P Kozlowski, M Sowden, E Messing, and HC Smith

A quantitative assay for assessing allelic proportions by iterative gap ligation
Nucl. Acids Res. 1998 26: 961-966. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

MJ Rieder, SL Taylor, VO Tobe, and DA Nickerson

Automating the identification of DNA variations using quality-based fluorescence re-sequencing: analysis of the human mitochondrial genome
Nucl. Acids Res. 1998 26: 967-973. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

RB Cary, F Chen, Z Shen, and DJ Chen

A central region of Ku80 mediates interaction with Ku70 in vivo
Nucl. Acids Res. 1998 26: 974-979. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

SR Lynch and I Tinoco, Jr

The structure of the L3 loop from the hepatitis delta virus ribozyme: a syn cytidine
Nucl. Acids Res. 1998 26: 980-987. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

T Tsuzuki and DE Rancourt

Embryonic stem cell gene targeting using bacteriophage lambda vectors generated by phage-plasmid recombination
Nucl. Acids Res. 1998 26: 988-993. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

CA Johnson, LP O'Neill, A Mitchell, and BM Turner

Distinctive patterns of histone H4 acetylation are associated with defined sequence elements within both heterochromatic and euchromatic regions of the human genome
Nucl. Acids Res. 1998 26: 994-1001. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Y Bu and MC Schmidt

Identification of cis-acting elements in the SUC2 promoter of Saccharomyces cerevisiae required for activation of transcription
Nucl. Acids Res. 1998 26: 1002-1009. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

F Seela, H Debelak, N Usman, A Burgin, and L Beigelman

1-Deazaadenosine: synthesis and activity of base-modified hammerhead ribozymes
Nucl. Acids Res. 1998 26: 1010-1018. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

DH Shain, MX Zuber, and T Neuman

Transcription initiation from a poly(dA) tract
Nucl. Acids Res. 1998 26: 1019-1025. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

B Mullah, K Livak, A Andrus, and P Kenney

Efficient synthesis of double dye-labeled oligodeoxyribonucleotide probes and their application in a real time PCR assay
Nucl. Acids Res. 1998 26: 1026-1031. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

MR Shen, MZ Zdzienicka, H Mohrenweiser, LH Thompson, and MP Thelen

Mutations in hamster single-strand break repair gene XRCC1 causing defective DNA repair
Nucl. Acids Res. 1998 26: 1032-1037. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Y Liu, EJ Oakeley, L Sun, and JP Jost

Multiple domains are involved in the targeting of the mouse DNA methyltransferase to the DNA replication foci
Nucl. Acids Res. 1998 26: 1038-1045. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

C Vargeese, J Carter, J Yegge, S Krivjansky, A Settle, E Kropp, K Peterson, and W Pieken

Efficient activation of nucleoside phosphoramidites with 4,5- dicyanoimidazole during oligonucleotide synthesis
Nucl. Acids Res. 1998 26: 1046-1050. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

LR Benjamin and DS Gilmour

Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter
Nucl. Acids Res. 1998 26: 1051-1055. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

R Panstruga, R Buschges, P Piffanelli, and P Schulze-Lefert

A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome
Nucl. Acids Res. 1998 26: 1056-1062. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

K Mizuta, R Tsujii, JR Warner, and M Nishiyama

The C-terminal silencing domain of Rap1p is essential for the repression of ribosomal protein genes in response to a defect in the secretory pathway
Nucl. Acids Res. 1998 26: 1063-1069. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

WR Jones and MP Stone

Site-specific targeting of aflatoxin adduction directed by triple helix formation in the major groove of oligodeoxyribonucleotides
Nucl. Acids Res. 1998 26: 1070-1075. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

B Holz, S Klimasauskas, S Serva, and E Weinhold

2-Aminopurine as a fluorescent probe for DNA base flipping by methyltransferases
Nucl. Acids Res. 1998 26: 1076-1083. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

K Stankevicius, A Lubys, A Timinskas, D Vaitkevicius, and A Janulaitis

Cloning and analysis of the four genes coding for Bpu10I restriction- modification enzymes
Nucl. Acids Res. 1998 26: 1084-1091. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

DL Baker, V Dave, T Reed, S Misra, and M Periasamy

A novel E box/AT-rich element is required for muscle-specific expression of the sarcoplasmic reticulum Ca2+-ATPase (SERCA2) gene
Nucl. Acids Res. 1998 26: 1092-1098. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

K Pongracz and SM Gryaznov

alpha-Oligodeoxyribonucleotide N3'-->P5' phosphoramidates: synthesis and duplex formation
Nucl. Acids Res. 1998 26: 1099-1106. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

AV Lukashin and M Borodovsky

GeneMark.hmm: new solutions for gene finding
Nucl. Acids Res. 1998 26: 1107-1115. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

WW Kuang, DA Thompson, RV Hoch, and RJ Weigel

Differential screening and suppression subtractive hybridization identified genes differentially expressed in an estrogen receptor- positive breast carcinoma cell line
Nucl. Acids Res. 1998 26: 1116-1123. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

JA Hejna, PL Johnstone, SL Kohler, DA Bruun, CA Reifsteck, SB Olson, and RE Moses

Functional complementation by electroporation of human BACs into mammalian fibroblast cells
Nucl. Acids Res. 1998 26: 1124-1125. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Z Chen and DE Ruffner

Amplification of closed circular DNA in vitro
Nucl. Acids Res. 1998 26: 1126-1127. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

D Zaccaria Roberta Greco, H MacWilliams, S Bozzaro, and A Ceccarelli

UGUS, a reporter for use with destabilizing N-termini
Nucl. Acids Res. 1998 26: 1128-1129. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Bonnet, G Prevot, and C Bourgouin

Efficient reamplification of differential display products by transient ligation and thermal asymmetric PCR
Nucl. Acids Res. 1998 26: 1130-1131. [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

S Golz, K Birkenkamp-Demtroder, and B Kemper

Enzymatic mutation detection. Procedure for screening and mapping of mutations by immobilised endonuclease VII
Nucl. Acids Res. 1998 26: 1132-1133. [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

J Zwicker, FC Lucibello, V Jerome, S Brusselbach, and R Muller

CDF-1 mediated repression of cell cycle genes targets a specific subset of transactivators [corrected and republished article with original paging, article originally printed in Nucleic Acids Res 1997 Dec 15;25(24):4926-32]
Nucl. Acids Res. 1998 26: 4926-4932. [Abstract] [Request Permissions]  

Letters:

C Ehresmann, B Ehresmann, R Marquet, and M Wainberg

A sequence analysis of the primer binding site (PBS) region of the RNA genome of simian and human immunodeficiency viruses (SIV and HIV) [corrected and republished in Nucleic Acids Res 1998 Apr 1;26(7):1134]
Nucl. Acids Res. 1998 26: 1134. [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

Corrigenda:

K.L. Triman, A. Peister, and R.A. Goel

Expanded versions of the 16S and 23S Ribosomal RNA Mutation Database (16SMDBexp and 23SMDBexp)
Nucl. Acids Res. 2004 26: 0; doi:10.1093/nar/26.4.0 [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

Errata:

T.D. Schneider

Sequence walkers: a graphical method to display how binding proteins interact with DNA or RNA sequences
Nucl. Acids Res. 2004 26: 0; doi:10.1093/nar/26.4.0-a [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

J. Zwicker, F.C. Lucibello, V. Jérôme, S. Brüsselbach, and R. Müller

CDF-1-mediated repression of cell cycle genes targets a specific subset of transactivators
Nucl. Acids Res. 2004 26: 0; doi:10.1093/nar/26.4.0-b [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

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