Nucleic Acids Research

Editorial:

Editorial
Nucl. Acids Res. 2000 28: 0; doi:10.1093/nar/28.20.0 [Print PDF] [Request Permissions]  

Articles:

Roderic D. M. Page

Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching
Nucl. Acids Res. 2000 28: 3839-3845; doi:10.1093/nar/28.20.3839 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tomoko Ohya, Satoko Maki, Yasuo Kawasaki, and Akio Sugino

Structure and function of the fourth subunit (Dpb4p) of DNA polymerase in Saccharomyces cerevisiae
Nucl. Acids Res. 2000 28: 3846-3852; doi:10.1093/nar/28.20.3846 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Amanda K. Lukens, Daniel A. King, and Ronen Marmorstein

Structure of HAP1-PC7 bound to DNA: implications for DNA recognition and allosteric effects of DNA-binding on transcriptional activation
Nucl. Acids Res. 2000 28: 3853-3863; doi:10.1093/nar/28.20.3853 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Doug Read, Manish J. Butte, Abby F. Dernburg, Manfred Frasch, and Thomas B. Kornberg

Functional studies of the BTB domain in the Drosophila GAGA and Mod(mdg4) proteins
Nucl. Acids Res. 2000 28: 3864-3870; doi:10.1093/nar/28.20.3864 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Masood Z. Hadi, Matthew A. Coleman, Krzysztof Fidelis, Harvey W. Mohrenweiser, and David M. Wilson III

Functional characterization of Ape1 variants identified in the human population
Nucl. Acids Res. 2000 28: 3871-3879; doi:10.1093/nar/28.20.3871 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Uma Lakshmipathy and Colin Campbell

Mitochondrial DNA ligase III function is independent of Xrcc1
Nucl. Acids Res. 2000 28: 3880-3886; doi:10.1093/nar/28.20.3880 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Momchil D. Vodenicharov, Frédéric R. Sallmann, Masahiko S. Satoh, and Guy G. Poirier

Base excision repair is efficient in cells lacking poly(ADP-ribose) polymerase 1
Nucl. Acids Res. 2000 28: 3887-3896; doi:10.1093/nar/28.20.3887 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

David Loebel, Hella Huikeshoven, and Sue Cotterill

Localisation of the DmCdc45 DNA replication factor in the mitotic cycle and during chorion gene amplification
Nucl. Acids Res. 2000 28: 3897-3903; doi:10.1093/nar/28.20.3897 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hong-Khanh Nguyen and Edwin M. Southern

Minimising the secondary structure of DNA targets by incorporation of a modified deoxynucleoside: implications for nucleic acid analysis by hybridisation
Nucl. Acids Res. 2000 28: 3904-3909; doi:10.1093/nar/28.20.3904 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kristina Böhlke, Francesca M. Pisani, Constantinos E. Vorgias, Bruno Frey, Harald Sobek, Mosè Rossi, and Garabed Antranikian

PCR performance of the B-type DNA polymerase from the thermophilic euryarchaeon Thermococcus aggregans improved by mutations in the Y-GG/A motif
Nucl. Acids Res. 2000 28: 3910-3917; doi:10.1093/nar/28.20.3910 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Li-Kwan Chang and Shih-Tung Liu

Activation of the BRLF1 promoter and lytic cycle of Epstein–Barr virus by histone acetylation
Nucl. Acids Res. 2000 28: 3918-3925; doi:10.1093/nar/28.20.3918 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Esther Yu and George W. Owttrim

Characterization of the cold stress-induced cyanobacterial DEAD-box protein CrhC as an RNA helicase
Nucl. Acids Res. 2000 28: 3926-3934; doi:10.1093/nar/28.20.3926 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Stephan Weser, Michael Bachmann, Klaus H. Seifart, and Wolfgang Meißner

Transcription efficiency of human polymerase III genes in vitro does not depend on the RNP-forming autoantigen La
Nucl. Acids Res. 2000 28: 3935-3942; doi:10.1093/nar/28.20.3935 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Gordana Raca, Elena Yu. Siyanova, Cynthia T. McMurray, and Sergei M. Mirkin

Expansion of the (CTG)_n repeat in the 5'-UTR of a reporter gene impedes translation
Nucl. Acids Res. 2000 28: 3943-3949; doi:10.1093/nar/28.20.3943 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Robert D. Scavetta, Chad B. Thomas, Martin A. Walsh, Sandra Szegedi, Andrzej Joachimiak, Richard I. Gumport, and Mair E. A. Churchill

Structure of RsrI methyltransferase, a member of the N6-adenine ß class of DNA methyltransferases
Nucl. Acids Res. 2000 28: 3950-3961; doi:10.1093/nar/28.20.3950 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Sandra S. Szegedi, Norbert O. Reich, and Richard I. Gumport

Substrate binding in vitro and kinetics of RsrI [N6-adenine] DNA methyltransferase
Nucl. Acids Res. 2000 28: 3962-3971; doi:10.1093/nar/28.20.3962 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sandra S. Szegedi and Richard I. Gumport

DNA binding properties in vivo and target recognition domain sequence alignment analyses of wild-type and mutant RsrI [N6-adenine] DNA methyltransferases
Nucl. Acids Res. 2000 28: 3972-3981; doi:10.1093/nar/28.20.3972 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kotaro J. Kaneko and Melvin L. DePamphilis

Soggy, a spermatocyte-specific gene, lies 3.8 kb upstream of and antipodal to TEAD-2, a transcription factor expressed at the beginning of mouse development
Nucl. Acids Res. 2000 28: 3982-3990; doi:10.1093/nar/28.20.3982 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Stella Tommasi, Alexandros B. Oxyzoglou, and Gerd P. Pfeifer

Cell cycle-independent removal of UV-induced pyrimidine dimers from the promoter and the transcription initiation domain of the human CDC2 gene
Nucl. Acids Res. 2000 28: 3991-3998; doi:10.1093/nar/28.20.3991 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Norio Ogata and Hirofumi Morino

Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus
Nucl. Acids Res. 2000 28: 3999-4004; doi:10.1093/nar/28.20.3999 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sergey B. Zotchev, Marina Protopopova, and Galina Selivanova

p53 C-terminal interaction with DNA ends and gaps has opposing effect on specific DNA binding by the core
Nucl. Acids Res. 2000 28: 4005-4012; doi:10.1093/nar/28.20.4005 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Paul A. Dawson and Joan C. Marini

Hammerhead ribozymes selectively suppress mutant type I collagen mRNA in osteogenesis imperfecta fibroblasts
Nucl. Acids Res. 2000 28: 4013-4020; doi:10.1093/nar/28.20.4013 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hiroyuki Ogata, Wataru Fujibuchi, Susumu Goto, and Minoru Kanehisa

A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters
Nucl. Acids Res. 2000 28: 4021-4028; doi:10.1093/nar/28.20.4021 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Wataru Fujibuchi, Hiroyuki Ogata, Hideo Matsuda, and Minoru Kanehisa

Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping
Nucl. Acids Res. 2000 28: 4029-4036; doi:10.1093/nar/28.20.4029 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andres A. Rojas, Alejandro Vazquez-Tello, Gerardo Ferbeyre, Federica Venanzetti, Lutz Bachmann, Bruno Paquin, Valerio Sbordoni, and Robert Cedergren

Hammerhead-mediated processing of satellite pDo500 family transcripts from Dolichopoda cave crickets
Nucl. Acids Res. 2000 28: 4037-4043; doi:10.1093/nar/28.20.4037 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hong Xin, Susann Taudte, Neville R. Kallenbach, M. Paullin Limbach, and Richard S. Zitomer

DNA binding by single HMG box model proteins
Nucl. Acids Res. 2000 28: 4044-4050; doi:10.1093/nar/28.20.4044 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

J. A. Coronella, P. Telleman, T. D. Truong, F. Ylera, and R. P. Junghans

Amplification of IgG VH and VL (Fab) from single human plasma cells and B cells
Nucl. Acids Res. 2000 28: e85; doi:10.1093/nar/28.20.e85 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Eckhard Nordhoff, Christine Luebbert, Gabriela Thiele, Volker Heiser, and Hans Lehrach

Rapid determination of short DNA sequences by the use of MALDI-MS
Nucl. Acids Res. 2000 28: e86; doi:10.1093/nar/28.20.e86 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Céline Adessi, Gilles Matton, Guidon Ayala, Gerardo Turcatti, Jean-Jacques Mermod, Pascal Mayer, and Eric Kawashima

Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms
Nucl. Acids Res. 2000 28: e87; doi:10.1093/nar/28.20.e87 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Valérie Abécassis, Denis Pompon, and Gilles Truan

High efficiency family shuffling based on multi-step PCR and in vivo DNA recombination in yeast: statistical and functional analysis of a combinatorial library between human cytochrome P450 1A1 and 1A2
Nucl. Acids Res. 2000 28: e88; doi:10.1093/nar/28.20.e88 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Bianca J. C. van den Bosch, René F. M. de Coo, Hans R. Scholte, Jeroen G. Nijland, Ruud van den Bogaard, Marianne de Visser, Christine E. M. de Die-Smulders, and Hubert J. M. Smeets

Mutation analysis of the entire mitochondrial genome using denaturing high performance liquid chromatography
Nucl. Acids Res. 2000 28: e89; doi:10.1093/nar/28.20.e89 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Denis V. Rebrikov, Olga V. Britanova, Nadya G. Gurskaya, Konstantin A. Lukyanov, Victor S. Tarabykin, and Sergey A. Lukyanov

Mirror orientation selection (MOS): a method for eliminating false positive clones from libraries generated by suppression subtractive hybridization
Nucl. Acids Res. 2000 28: e90; doi:10.1093/nar/28.20.e90 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Robert Möller, Andrea Csáki, J. Michael Köhler, and Wolfgang Fritzsche

DNA probes on chip surfaces studied by scanning force microscopy using specific binding of colloidal gold
Nucl. Acids Res. 2000 28: e91; doi:10.1093/nar/28.20.e91 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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