Nucleic Acids Research

Editorial:

Editorial
Nucl. Acids Res. 2000 28: 0; doi:10.1093/nar/28.23.0 [Print PDF] [Request Permissions]  

Articles:

Claudine Dherin, Miral Dizdaroglu, Hélène Doerflinger, Serge Boiteux, and J. Pablo Radicella

Repair of oxidative DNA damage in Drosophila melanogaster: identification and characterization of dOgg1, a second DNA glycosylase activity for 8-hydroxyguanine and formamidopyrimidines
Nucl. Acids Res. 2000 28: 4583-4592; doi:10.1093/nar/28.23.4583 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Xianghong Li and A-Lien Lu

Intact MutY and its catalytic domain differentially contact with A/8-oxoG-containing DNA
Nucl. Acids Res. 2000 28: 4593-4603; doi:10.1093/nar/28.23.4593 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Klaus Hellmuth, Henri Grosjean, Yuri Motorin, Karina Deinert, Ed Hurt, and George Simos

Cloning and characterization of the Schizosaccharomyces pombe tRNA:pseudouridine synthase Pus1p
Nucl. Acids Res. 2000 28: 4604-4610; doi:10.1093/nar/28.23.4604 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Elin Grahn, Nicola J. Stonehouse, Chris J. Adams, Kerstin Fridborg, Leonid Beigelman, Jasenka Matulic-Adamic, Stuart L. Warriner, Peter G. Stockley, and Lars Liljas

Deletion of a single hydrogen bonding atom from the MS2 RNA operator leads to dramatic rearrangements at the RNA–coat protein interface
Nucl. Acids Res. 2000 28: 4611-4616; doi:10.1093/nar/28.23.4611 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Ariadna Benet, Gemma Mollà, and Fernando Azorín

d(GA·TC)_n microsatellite DNA sequences enhance homologous DNA recombination in SV40 minichromosomes
Nucl. Acids Res. 2000 28: 4617-4622; doi:10.1093/nar/28.23.4617 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kenneth Zahn, Masayuki Inui, and Hideaki Yukawa

Divergent mechanisms of 5' 23S rRNA IVS processing in the -proteobacteria
Nucl. Acids Res. 2000 28: 4623-4633; doi:10.1093/nar/28.23.4623 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

John J. Turchi, Karen M. Henkels, and Yun Zhou

Cisplatin–DNA adducts inhibit translocation of the Ku subunits of DNA-PK
Nucl. Acids Res. 2000 28: 4634-4641; doi:10.1093/nar/28.23.4634 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Marie-Agnès Petit and S. Dusko Ehrlich

The NAD-dependent ligase encoded by yerG is an essential gene of Bacillus subtilis
Nucl. Acids Res. 2000 28: 4642-4648; doi:10.1093/nar/28.23.4642 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Lorraine S. Symington, Leslie E. Kang, and Sylvie Moreau

Alteration of gene conversion tract length and associated crossing over during plasmid gap repair in nuclease-deficient strains of Saccharomyces cerevisiae
Nucl. Acids Res. 2000 28: 4649-4656; doi:10.1093/nar/28.23.4649 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andrey R. Pavlov and Jim D. Karam

Nucleotide-sequence-specific and non-specific interactions of T4 DNA polymerase with its own mRNA
Nucl. Acids Res. 2000 28: 4657-4664; doi:10.1093/nar/28.23.4657 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Benoît Pinson, Torill L. Kongsrud, Eli Ording, Lena Johansen, Bertrand Daignan-Fornier, and Odd S. Gabrielsen

Signaling through regulated transcription factor interaction: mapping of a regulatory interaction domain in the Myb-related Bas1p
Nucl. Acids Res. 2000 28: 4665-4673; doi:10.1093/nar/28.23.4665 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Maryse Germanier, Martine Defais, Vilhelm A. Bohr, and Florence Larminat

Transcription-coupled repair is inducible in hamster cells
Nucl. Acids Res. 2000 28: 4674-4678; doi:10.1093/nar/28.23.4674 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

David M. Prescott and Sarah J. Dizick

A unique pattern of intrastrand anomalies in base composition of the DNA in hypotrichs
Nucl. Acids Res. 2000 28: 4679-4688; doi:10.1093/nar/28.23.4679 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Ken Matsumoto, Kazuma Aoki, Naoshi Dohmae, Koji Takio, and Masafumi Tsujimoto

CIRP2, a major cytoplasmic RNA-binding protein in Xenopus oocytes
Nucl. Acids Res. 2000 28: 4689-4697; doi:10.1093/nar/28.23.4689 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jan Wuyts, Peter De Rijk, Yves Van de Peer, Greet Pison, Peter Rousseeuw, and Rupert De Wachter

Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA
Nucl. Acids Res. 2000 28: 4698-4708; doi:10.1093/nar/28.23.4698 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Ralf Behrens, Jacky Hayles, and Paul Nurse

Fission yeast retrotransposon Tf1 integration is targeted to 5' ends of open reading frames
Nucl. Acids Res. 2000 28: 4709-4716; doi:10.1093/nar/28.23.4709 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yanbin Zhang, Fenghua Yuan, Xiaohua Wu, Olga Rechkoblit, John-Stephen Taylor, Nicholas E. Geacintov, and Zhigang Wang

Error-prone lesion bypass by human DNA polymerase
Nucl. Acids Res. 2000 28: 4717-4724; doi:10.1093/nar/28.23.4717 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jeanne Menez, Valérie Heurgué-Hamard, and Richard H. Buckingham

Sequestration of specific tRNA species cognate to the last sense codon of an overproduced gratuitous protein
Nucl. Acids Res. 2000 28: 4725-4732; doi:10.1093/nar/28.23.4725 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Mei-Jung Wang, Yi-Chien Lin, Te-Ling Pang, Jui-Mei Lee, Chia-Ching Chou, and Jing-Jer Lin

Telomere-binding and Stn1p-interacting activities are required for the essential function of Saccharomyces cerevisiae Cdc13p
Nucl. Acids Res. 2000 28: 4733-4741; doi:10.1093/nar/28.23.4733 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Mu Wang, Jang-Su Park, Masamichi Ishiai, Jerard Hurwitz, and Suk-Hee Lee

Species specificity of human RPA in simian virus 40 DNA replication lies in T-antigen-dependent RNA primer synthesis
Nucl. Acids Res. 2000 28: 4742-4749; doi:10.1093/nar/28.23.4742 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tamara L. Horton and Laura F. Landweber

Mitochondrial RNAs of myxomycetes terminate with non-encoded 3' poly(U) tails
Nucl. Acids Res. 2000 28: 4750-4754; doi:10.1093/nar/28.23.4750 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Claudina Alemán, Astrid M. Roy-Engel, Tamim H. Shaikh, and Prescott L. Deininger

Cis-acting influences on Alu RNA levels
Nucl. Acids Res. 2000 28: 4755-4761; doi:10.1093/nar/28.23.4755 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Peng Wu and Naoki Sugimoto

Transition characteristics and thermodynamic analysis of DNA duplex formation: a quantitative consideration for the extent of duplex association
Nucl. Acids Res. 2000 28: 4762-4768; doi:10.1093/nar/28.23.4762 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Masako Izumi, Ken-ichiro Yanagi, Takeshi Mizuno, Masayuki Yokoi, Yasuo Kawasaki, Kyeong-Yeop Moon, Jerard Hurwitz, Fumio Yatagai, and Fumio Hanaoka

The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G₂ phase
Nucl. Acids Res. 2000 28: 4769-4777; doi:10.1093/nar/28.23.4769 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Elisabetta Marangoni, Nicolas Foray, Mark O’Driscoll, Sétha Douc-Rasy, Jacques Bernier, Jean Bourhis, and Penny Jeggo

A Ku80 fragment with dominant negative activity imparts a radiosensitive phenotype to CHO-K1 cells
Nucl. Acids Res. 2000 28: 4778-4782; doi:10.1093/nar/28.23.4778 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Qin Yu and Casey D. Morrow

Essential regions of the tRNA primer required for HIV-1 infectivity
Nucl. Acids Res. 2000 28: 4783-4789; doi:10.1093/nar/28.23.4783 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Caroline E. Grant, Donna L. May, and Roger G. Deeley

DNA binding and transcription activation by chicken interferon regulatory factor-3 (chIRF-3)
Nucl. Acids Res. 2000 28: 4790-4799; doi:10.1093/nar/28.23.4790 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Nianxiang Zhang, Xiaoshan Zhang, Carolyn Peterson, Lei Li, and Randy Legerski

Differential processing of UV mimetic and interstrand crosslink damage by XPF cell extracts
Nucl. Acids Res. 2000 28: 4800-4804; doi:10.1093/nar/28.23.4800 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Franck Toledo, Arnaud Coquelle, Ekaterina Svetlova, and Michelle Debatisse

Enhanced flexibility and aphidicolin-induced DNA breaks near mammalian replication origins: implications for replicon mapping and chromosome fragility
Nucl. Acids Res. 2000 28: 4805-4813; doi:10.1093/nar/28.23.4805 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Edya Fuhrmann-Benzakein, Irène García-Gabay, Michael S. Pepper, Jean-Dominique Vassalli, and Pedro Luis Herrera

Inducible and irreversible control of gene expression using a single transgene
Nucl. Acids Res. 2000 28: e99; doi:10.1093/nar/28.23.e99 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sascha Sauer, Doris Lechner, Kurt Berlin, Christine Plançon, Arno Heuermann, Hans Lehrach, and Ivo Glynne Gut

Full flexibility genotyping of single nucleotide polymorphisms by the GOOD assay
Nucl. Acids Res. 2000 28: e100; doi:10.1093/nar/28.23.e100 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Donald C. Porter and Khandan Keyomarsi

Novel splice variants of cyclin E with altered substrate specificity
Nucl. Acids Res. 2000 28: e101; doi:10.1093/nar/28.23.e101 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Philip R. Hardwidge, Jeff M. Zimmerman, and L. James Maher, III

Design and calibration of a semi-synthetic DNA phasing assay
Nucl. Acids Res. 2000 28: e102; doi:10.1093/nar/28.23.e102 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yi-Mo Deng, Jun-Heon Lee, Chris Moran, Jun-Hua Jin, Bernard E. Tuch, and William D. Rawlinson

Mapping dispersed repetitive loci using semi-specific PCR cloning and somatic cell hybrid mapping
Nucl. Acids Res. 2000 28: e103; doi:10.1093/nar/28.23.e103 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

F. H. E. Schagen, H. J. Rademaker, S. J. Cramer, H. van Ormondt, A. J. van der Eb, P. van de Putte, and R. C. Hoeben

Towards integrating vectors for gene therapy: expression of functional bacteriophage MuA and MuB proteins in mammalian cells
Nucl. Acids Res. 2000 28: e104; doi:10.1093/nar/28.23.e104 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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