Nucleic Acids Research

Articles:

Lloyd A. Pereira, Karen Bentley, Anna Peeters, Melissa J Churchill, and Nicholas J. Deacon

SURVEY AND SUMMARY A compilation of cellular transcription factor interactions with the HIV-1 LTR promoter
Nucl. Acids Res. 2000 28: 663-668; doi:10.1093/nar/28.3.663 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Satoru Kyo, Masahiro Takakura, Takahiro Taira, Taro Kanaya, Hideaki Itoh, Masuo Yutsudo, Hiroyoshi Ariga, and Masaki Inoue

Sp1 cooperates with c-Myc to activate transcription of the human telomerase reverse transcriptase gene (hTERT)
Nucl. Acids Res. 2000 28: 669-677; doi:10.1093/nar/28.3.669 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Paul M. Ajuh, Gareth J. Browne, Nicola A. Hawkes, Patricia T. W. Cohen, Stefan G. E. Roberts, and Angus I. Lamond

Association of a protein phosphatase 1 activity with the human factor C1 (HCF) complex
Nucl. Acids Res. 2000 28: 678-686; doi:10.1093/nar/28.3.678 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Mark Stoneley, Tatyana Subkhankulova, John P. C. Le Quesne, Mark J. Coldwell, Catherine L. Jopling, Graham J. Belsham, and Anne E. Willis

Analysis of the c-myc IRES; a potential role for cell-type specific trans-acting factors and the nuclear compartment
Nucl. Acids Res. 2000 28: 687-694; doi:10.1093/nar/28.3.687 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

M. S. Gelfand, E. V. Koonin, and A. A. Mironov

Prediction of transcription regulatory sites in Archaea by a comparative genomic approach
Nucl. Acids Res. 2000 28: 695-705; doi:10.1093/nar/28.3.695 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Peder Worning, Lars J. Jensen, Karen E. Nelson, Søren Brunak, and David W. Ussery

Structural analysis of DNA sequence: evidence for lateral gene transfer in Thermotoga maritima
Nucl. Acids Res. 2000 28: 706-709; doi:10.1093/nar/28.3.706 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Luca Varani, Maria Grazia Spillantini, Michel Goedert, and Gabriele Varani

Structural basis for recognition of the RNA major groove in the tau exon 10 splicing regulatory element by aminoglycoside antibiotics
Nucl. Acids Res. 2000 28: 710-719; doi:10.1093/nar/28.3.710 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jens M. Warnecke, Erik J. Sontheimer, Joseph A. Piccirilli, and Roland K. Hartmann

Active site constraints in the hydrolysis reaction catalyzed by bacterial RNase P: analysis of precursor tRNAs with a single 3'-S-phosphorothiolate internucleotide linkage
Nucl. Acids Res. 2000 28: 720-727; doi:10.1093/nar/28.3.720 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Evripidis Gavathiotis, Gary J. Sharman, and Mark S. Searle

Sequence-dependent variation in DNA minor groove width dictates orientational preference of Hoechst 33258 in A-tract recognition: solution NMR structure of the 2:1 complex with d(CTTTTGCAAAAG)₂
Nucl. Acids Res. 2000 28: 728-735; doi:10.1093/nar/28.3.728 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Mary Elizabeth Gagou, M. A. Rodriguez Gabriel, Juan P. G. Ballesta, and Sophia Kouyanou

The ribosomal P-proteins of the medfly Ceratitis capitata form a heterogeneous stalk structure interacting with the endogenous P-proteins, in conditional P0-null strains of the yeast Saccharomyces cerevisiae
Nucl. Acids Res. 2000 28: 736-743; doi:10.1093/nar/28.3.736 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

T. A. Thanaraj

Positional characterisation of false positives from computational prediction of human splice sites
Nucl. Acids Res. 2000 28: 744-754; doi:10.1093/nar/28.3.744 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Karen E. Sandman and Christopher J. Noren

The efficiency of Escherichia coli selenocysteine insertion is influenced by the immediate downstream nucleotide
Nucl. Acids Res. 2000 28: 755-761; doi:10.1093/nar/28.3.755 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Christine M. Gifford and Susan S. Wallace

The genes encoding endonuclease VIII and endonuclease III in Escherichia coli are transcribed as the terminal genes in operons
Nucl. Acids Res. 2000 28: 762-769; doi:10.1093/nar/28.3.762 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Paula Rodrigues Hoyne, A. Marquis Gacy, Cynthia T. McMurray, and L. James Maher III

Stabilities of intrastrand pyrimidine motif DNA and RNA triple helices
Nucl. Acids Res. 2000 28: 770-775; doi:10.1093/nar/28.3.770 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tatsuo Ohmichi and Eric T. Kool

The virtues of self-binding: high sequence specificity for RNA cleavage by self-processed hammerhead ribozymes
Nucl. Acids Res. 2000 28: 776-783; doi:10.1093/nar/28.3.776 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Luiz R. O. Tosi and Stephen M. Beverley

cis and trans factors affecting Mos1 mariner evolution and transposition in vitro, and its potential for functional genomics
Nucl. Acids Res. 2000 28: 784-790; doi:10.1093/nar/28.3.784 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Anders H. Lund, Mogens Duch, and Finn Skou Pedersen

Selection of functional tRNA primers and primer binding site sequences from a retroviral combinatorial library: identification of new functional tRNA primers in murine leukemia virus replication
Nucl. Acids Res. 2000 28: 791-799; doi:10.1093/nar/28.3.791 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Nicola E. Wittekindt, Konstanze Hörtnagel, Christian Geltinger, and Axel Polack

Activation of c-myc promoter P1 by immunoglobulin  gene enhancers in Burkitt lymphoma: functional characterization of the intron enhancer motifs B, E box 1 and E box 2, and of the 3' enhancer motif PU
Nucl. Acids Res. 2000 28: 800-808; doi:10.1093/nar/28.3.800 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Thomas K. Albert, Marc Lemaire, Nynke L. van Berkum, Reiner Gentz, Martine A. Collart, and H. Th. Marc Timmers

Isolation and characterization of human orthologs of yeast CCR4–NOT complex subunits
Nucl. Acids Res. 2000 28: 809-817; doi:10.1093/nar/28.3.809 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yves Aubert, Sylvain Bourgerie, Laurent Meunier, Roger Mayer, Annie-Claude Roche, Michel Monsigny, Nguyen T. Thuong, and Ulysse Asseline

Optimized synthesis of phosphorothioate oligodeoxyribonucleotides substituted with a 5'-protected thiol function and a 3'-amino group
Nucl. Acids Res. 2000 28: 818-825; doi:10.1093/nar/28.3.818 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sanggyu Lee and Mark D. Garfinkel

Characterization of Drosophila OVO protein DNA binding specificity using random DNA oligomer selection suggests zinc finger degeneration
Nucl. Acids Res. 2000 28: 826-834; doi:10.1093/nar/28.3.826 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Lori Lommel, Sean M. Gregory, Karen I. Becker, and Kevin S. Sweder

Transcription-coupled DNA repair in yeast transcription factor IIE (TFIIE) mutants
Nucl. Acids Res. 2000 28: 835-842; doi:10.1093/nar/28.3.835 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Mohammad Mohammad, Swati Saha, and Geoffrey M. Kapler

Three different proteins recognize a multifunctional determinant that controls replication initiation, fork arrest and transcription in Tetrahymena
Nucl. Acids Res. 2000 28: 843-851; doi:10.1093/nar/28.3.843 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Murray J. Cairns, Andrew King, and Lun-Quan Sun

Nucleic acid mutation analysis using catalytic DNA
Nucl. Acids Res. 2000 28: e9; doi:10.1093/nar/28.3.e9 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

J. Nicholas Housby, Sigrídur H. Thorbjarnardóttir, Zophonías O. Jónsson, and Edwin M. Southern

Optimised ligation of oligonucleotides by thermal ligases: comparison of Thermus scotoductus and Rhodothermus marinus DNA ligases to other thermophilic ligases
Nucl. Acids Res. 2000 28: e10; doi:10.1093/nar/28.3.e10 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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