Nucleic Acids Research

Articles:

Michela A. Denti, A. Emilio Martínez de Alba, Rudolf Sägesser, Mina Tsagris, and Martin Tabler

A novel RNA-binding protein from Triturus carnifex identified by RNA-ligand screening with the newt hammerhead ribozyme
Nucl. Acids Res. 2000 28: 1045-1052; doi:10.1093/nar/28.5.1045 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Christoph Grunau, Ruben Schattevoy, Niels Mache, and André Rosenthal

MethTools—a toolbox to visualize and analyze DNA methylation data
Nucl. Acids Res. 2000 28: 1053-1058; doi:10.1093/nar/28.5.1053 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Steven J. Evans, Mark J. Fogg, Anthony Mamone, Maria Davis, Laurence H. Pearl, and Bernard A. Connolly

Improving dideoxynucleotide-triphosphate utilisation by the hyper-thermophilic DNA polymerase from the archaeon Pyrococcus furiosus
Nucl. Acids Res. 2000 28: 1059-1066; doi:10.1093/nar/28.5.1059 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Matthew C. Biery, Fiona J. Stewart, Anne E. Stellwagen, Elisabeth A. Raleigh, and Nancy L. Craig

A simple in vitro Tn7-based transposition system with low target site selectivity for genome and gene analysis
Nucl. Acids Res. 2000 28: 1067-1077; doi:10.1093/nar/28.5.1067 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Chunyang Bai and Peter P. Tolias

Genetic analysis of a La homolog in Drosophila melanogaster
Nucl. Acids Res. 2000 28: 1078-1084; doi:10.1093/nar/28.5.1078 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Elena A. Kubareva, Hubert Thole, Anna S. Karyagina, Tatiana S. Oretskaya, Alfred Pingoud, and Vera Pingoud

Identification of a base-specific contact between the restriction endonuclease SsoII and its recognition sequence by photocross-linking
Nucl. Acids Res. 2000 28: 1085-1091; doi:10.1093/nar/28.5.1085 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Eva María del Campo, Bartolomé Sabater, and Mercedes Martín

Transcripts of the ndhH–D operon of barley plastids: possible role of unedited site III in splicing of the ndhA intron
Nucl. Acids Res. 2000 28: 1092-1098; doi:10.1093/nar/28.5.1092 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Gianluca Tell, Alessandro Zecca, Lucia Pellizzari, Paola Spessotto, Alfonso Colombatti, Mark R. Kelley, Giuseppe Damante, and Carlo Pucillo

An ‘environment to nucleus’ signaling system operates in B lymphocytes: redox status modulates BSAP/Pax-5 activation through Ref-1 nuclear translocation
Nucl. Acids Res. 2000 28: 1099-1105; doi:10.1093/nar/28.5.1099 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Deborah E. Geiman, Han Ton-That, Jerainne M. Johnson, and Vincent W. Yang

Transactivation and growth suppression by the gut-enriched Krüppel-like factor (Krüppel-like factor 4) are dependent on acidic amino acid residues and protein–protein interaction
Nucl. Acids Res. 2000 28: 1106-1113; doi:10.1093/nar/28.5.1106 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yumin Teng and Raymond Waters

Excision repair at the level of the nucleotide in the upstream control region, the coding sequence and in the region where transcription terminates of the Saccharomyces cerevisiae MFA2 gene and the role of RAD26
Nucl. Acids Res. 2000 28: 1114-1119; doi:10.1093/nar/28.5.1114 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andreas Rang and Hans Will

The tetracycline-responsive promoter contains functional interferon-inducible response elements
Nucl. Acids Res. 2000 28: 1120-1125; doi:10.1093/nar/28.5.1120 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jongsook Kim, Ilia Rivera-Rivera, and Byron Kemper

Tissue-specific chromatin structure of the phenobarbital- responsive unit and proximal promoter of CYP2B1/2 and modulation by phenobarbital
Nucl. Acids Res. 2000 28: 1126-1132; doi:10.1093/nar/28.5.1126 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Anneloor L. M. A. ten Asbroek, Kees Fluiter, Marjon van Groenigen, Marleen Nooij, and Frank Baas

Polymorphisms in the large subunit of human RNA polymerase II as target for allele-specific inhibition
Nucl. Acids Res. 2000 28: 1133-1138; doi:10.1093/nar/28.5.1133 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Shlomit Yehudai-Resheff and Gadi Schuster

Characterization of the E.coli poly(A) polymerase: nucleotide specificity, RNA-binding affinities and RNA structure dependence
Nucl. Acids Res. 2000 28: 1139-1144; doi:10.1093/nar/28.5.1139 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Wenhui Li, Bahar Hesabi, Angela Babbo, Carol Pacione, Jingmei Liu, David J. Chen, Jac A. Nickoloff, and Zhiyuan Shen

Regulation of double-strand break-induced mammalian homologous recombination by UBL1, a RAD51-interacting protein
Nucl. Acids Res. 2000 28: 1145-1153; doi:10.1093/nar/28.5.1145 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Cheryl Bailey and Daniel L. Weeks

Understanding oligonucleotide-mediated inhibition of gene expression in Xenopus laevis oocytes
Nucl. Acids Res. 2000 28: 1154-1161; doi:10.1093/nar/28.5.1154 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Vipul S. Rana and Krishna N. Ganesh

Recognition of 5-aminouracil (U^#) in the central strand of a DNA triplex: orientation selective binding of different third strand bases
Nucl. Acids Res. 2000 28: 1162-1169; doi:10.1093/nar/28.5.1162 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Vasily V. Sosunov, Fanny Santamaria, Lyubov S. Victorova, Gilles Gosselin, Bernard Rayner, and Alexander A. Krayevsky

Stereochemical control of DNA biosynthesis
Nucl. Acids Res. 2000 28: 1170-1175; doi:10.1093/nar/28.5.1170 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Etsuko Miyamoto-Sato, Naoto Nemoto, Kensei Kobayashi, and Hiroshi Yanagawa

Specific bonding of puromycin to full-length protein at the C-terminus
Nucl. Acids Res. 2000 28: 1176-1182; doi:10.1093/nar/28.5.1176 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jun Guan, Steven DiBiase, and George Iliakis

The catalytic subunit DNA-dependent protein kinase (DNA-PKcs) facilitates recovery from radiation-induced inhibition of DNA replication
Nucl. Acids Res. 2000 28: 1183-1192; doi:10.1093/nar/28.5.1183 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andrey A. Stomakhin, Vadim A. Vasiliskov, Edward Timofeev, Dennis Schulga, Richard J. Cotter, and Andrei D. Mirzabekov

DNA sequence analysis by hybridization with oligonucleotide microchips: MALDI mass spectrometry identification of 5mers contiguously stacked to microchip oligonucleotides
Nucl. Acids Res. 2000 28: 1193-1198; doi:10.1093/nar/28.5.1193 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kazuo Yamamoto, Atsuro Koga, Mika Yamamoto, Yu-ichi Nishi, Taka-aki Tamura, Yasuhisa Nogi, and Masami Muramatsu

Identification of a novel 70 kDa protein that binds to the core promoter element and is essential for ribosomal DNA transcription
Nucl. Acids Res. 2000 28: 1199-1205; doi:10.1093/nar/28.5.1199 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yasuhiko Miwa, Atsuo Nakata, Atsushi Ogiwara, Mami Yamamoto, and Yasutaro Fujita

Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis
Nucl. Acids Res. 2000 28: 1206-1210; doi:10.1093/nar/28.5.1206 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Elizabeth J. Bates, Ellen Knuepfer, and Deborah F. Smith

Poly(A)-binding protein I of Leishmania: functional analysis and localisation in trypanosomatid parasites
Nucl. Acids Res. 2000 28: 1211-1220; doi:10.1093/nar/28.5.1211 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Veronica Juan, Chad Crain, and Charles Wilson

Evidence for evolutionarily conserved secondary structure in the H19 tumor suppressor RNA
Nucl. Acids Res. 2000 28: 1221-1227; doi:10.1093/nar/28.5.1221 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Xianming Mo, Tu Bailin, Scott Noggle, and Moshe J. Sadofsky

A highly ordered structure in V(D)J recombination cleavage complexes is facilitated by HMG1
Nucl. Acids Res. 2000 28: 1228-1236; doi:10.1093/nar/28.5.1228 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

José A. Carrodeguas and Daniel F. Bogenhagen

Protein sequences conserved in prokaryotic aminoacyl-tRNA synthetases are important for the activity of the processivity factor of human mitochondrial DNA polymerase
Nucl. Acids Res. 2000 28: 1237-1244; doi:10.1093/nar/28.5.1237 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Claude Monteilhet, Dorota Dziadkowiec, Tomasz Szczepanek, and Jaga Lazowska

Purification and characterization of the DNA cleavage and recognition site of I-ScaI mitochondrial group I intron encoded endonuclease produced in Escherichia coli
Nucl. Acids Res. 2000 28: 1245-1251; doi:10.1093/nar/28.5.1245 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Christopher J. Squire, L. J. Baker, George R. Clark, Roger F. Martin, and Jonathan White

Structures of m-iodo Hoechst–DNA complexes in crystals with reduced solvent content: implications for minor groove binder drug design
Nucl. Acids Res. 2000 28: 1252-1258; doi:10.1093/nar/28.5.1252 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

George R. Clark, Christopher J. Squire, L. J. Baker, Roger F. Martin, and Jonathan White

Intermolecular interactions and water structure in a condensed phase B-DNA crystal
Nucl. Acids Res. 2000 28: 1259-1265; doi:10.1093/nar/28.5.1259 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Michel Pelletier, Melissa M. Miller, and Laurie K. Read

RNA-binding properties of the mitochondrial Y-box protein RBP16
Nucl. Acids Res. 2000 28: 1266-1275; doi:10.1093/nar/28.5.1266 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andrey A. Arzumanov, Lyubov S. Victorova, Maxim V. Jasko, Dmitry S. Yesipov, and Alexander A. Krayevsky

Terminal deoxynucleotidyl transferase catalyzes the reaction of DNA phosphorylation
Nucl. Acids Res. 2000 28: 1276-1281; doi:10.1093/nar/28.5.1276 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Sascha Sauer, Doris Lechner, Kurt Berlin, Hans Lehrach, Jean-Louis Escary, Nick Fox, and Ivo Glynne Gut

A novel procedure for efficient genotyping of single nucleotide polymorphisms
Nucl. Acids Res. 2000 28: e13; doi:10.1093/nar/28.5.e13 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Bai-Gong Yue, Paul Ajuh, Göran Akusjärvi, Angus I. Lamond, and Jan-Peter Kreivi

Functional coexpression of serine protein kinase SRPK1 and its substrate ASF/SF2 in Escherichia coli
Nucl. Acids Res. 2000 28: e14; doi:10.1093/nar/28.5.e14 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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