Nucleic Acids Research

Articles:

Yukio Nagano, Hirofumi Furuhashi, Takehito Inaba, and Yukiko Sasaki

A novel class of plant-specific zinc-dependent DNA-binding protein that binds to A/T-rich DNA sequences
Nucl. Acids Res. 2001 29: 4097-4105; doi:10.1093/nar/29.20.4097 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hitoshi Nakayashiki, Hideki Matsuo, Izumi Chuma, Kenichi Ikeda, Shigeyuki Betsuyaku, Motoaki Kusaba, Yukio Tosa, and Shigeyuki Mayama

Pyret, a Ty3/Gypsy retrotransposon in Magnaporthe grisea contains an extra domain between the nucleocapsid and protease domains
Nucl. Acids Res. 2001 29: 4106-4113; doi:10.1093/nar/29.20.4106 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Iwona Hirschler-Laszkiewicz, Alice Cavanaugh, Qiyue Hu, Jason Catania, Maria Laura Avantaggiati, and Lawrence I. Rothblum

The role of acetylation in rDNA transcription
Nucl. Acids Res. 2001 29: 4114-4124; doi:10.1093/nar/29.20.4114 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Feng Xu, Xianglong Chen, Li Xin, Li Chen, Youxin Jin, and Debao Wang

Species-specific differences in the operational RNA code for aminoacylation of tRNA^Trp
Nucl. Acids Res. 2001 29: 4125-4133; doi:10.1093/nar/29.20.4125 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Stephanie E. Corrette-Bennett, Natasha L. Mohlman, Zulma Rosado, Juan José Miret, Patricia M. Hess, Breck O. Parker, and Robert S. Lahue

Efficient repair of large DNA loops in Saccharomyces cerevisiae
Nucl. Acids Res. 2001 29: 4134-4143; doi:10.1093/nar/29.20.4134 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Dorota A. Adamiak, Wojciech R. Rypniewski, Jan Milecki, and Ryszard W. Adamiak

The 1.19 Å X-ray structure of 2'-O-Me(CGCGCG)₂ duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove
Nucl. Acids Res. 2001 29: 4144-4153; doi:10.1093/nar/29.20.4144 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Daniel Fitzsimmons, Ryan Lutz, William Wheat, Helen M. Chamberlin, and James Hagman

Highly conserved amino acids in Pax and Ets proteins are required for DNA binding and ternary complex assembly
Nucl. Acids Res. 2001 29: 4154-4165; doi:10.1093/nar/29.20.4154 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Wenmao Meng, Tamara Belyaeva, Nigel J. Savery, Stephen J. W. Busby, Wilma E. Ross, Tamas Gaal, Richard L. Gourse, and Mark S. Thomas

UP element-dependent transcription at the Escherichia coli rrnB P1 promoter: positional requirements and role of the RNA polymerase subunit linker
Nucl. Acids Res. 2001 29: 4166-4178; doi:10.1093/nar/29.20.4166 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jenny C. Y. Ho, Nicholas J. Warr, Harumi Shimizu, and Felicity Z. Watts

SUMO modification of Rad22, the Schizosaccharomyces pombe homologue of the recombination protein Rad52
Nucl. Acids Res. 2001 29: 4179-4186; doi:10.1093/nar/29.20.4179 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

A. Van Aerschot, M. Meldgaard, G. Schepers, F. Volders, J. Rozenski, R. Busson, and P. Herdewijn

Improved hybridisation potential of oligonucleotides comprising O-methylated anhydrohexitol nucleoside congeners
Nucl. Acids Res. 2001 29: 4187-4194; doi:10.1093/nar/29.20.4187 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Annette J. B. Titheradge, Jonathan King, Junichi Ryu, and Noreen E. Murray

Families of restriction enzymes: an analysis prompted by molecular and genetic data for type ID restriction and modification systems
Nucl. Acids Res. 2001 29: 4195-4205; doi:10.1093/nar/29.20.4195 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Katsushi Yoshida, Aki Tosaka, Hiroyuki Kamiya, Takashi Murate, Hiroshi Kasai, Yuji Nimura, Masanori Ogawa, Shonen Yoshida, and Motoshi Suzuki

Arg660Ser mutation in Thermus aquaticus DNA polymerase I suppresses TC transitions: implication of wobble base pair formation at the nucleotide incorporation step
Nucl. Acids Res. 2001 29: 4206-4214; doi:10.1093/nar/29.20.4206 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Frederick S. Gimble

Degeneration of a homing endonuclease and its target sequence in a wild yeast strain
Nucl. Acids Res. 2001 29: 4215-4223; doi:10.1093/nar/29.20.4215 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Barbara Gatto, Sara Richter, Stefano Moro, Giovanni Capranico, and Manlio Palumbo

The topoisomerase II poison clerocidin alkylates non-paired guanines of DNA: implications for irreversible stimulation of DNA cleavage
Nucl. Acids Res. 2001 29: 4224-4230; doi:10.1093/nar/29.20.4224 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Lihong Jiang and Irina M. Russu

Proton exchange and local stability in a DNA triple helix containing a G.TA triad
Nucl. Acids Res. 2001 29: 4231-4237; doi:10.1093/nar/29.20.4231 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Li Liu, Michael C. Rice, and Eric B. Kmiec

In vivo gene repair of point and frameshift mutations directed by chimeric RNA/DNA oligonucleotides and modified single-stranded oligonucleotides
Nucl. Acids Res. 2001 29: 4238-4250; doi:10.1093/nar/29.20.4238 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Shirley J. Shi, Alicia Scheffer, Erik Bjeldanes, Mark A. Reynolds, and Lyle J. Arnold

DNA exhibits multi-stranded binding recognition on glass microarrays
Nucl. Acids Res. 2001 29: 4251-4256; doi:10.1093/nar/29.20.4251 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Antonio Solinas, Lynda J. Brown, Catherine McKeen, John M. Mellor, Jamie Nicol, Nicky Thelwell, and Tom Brown

Duplex Scorpion primers in SNP analysis and FRET applications
Nucl. Acids Res. 2001 29: e96; doi:10.1093/nar/29.20.e96 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Toru Tsuji, Michiko Onimaru, and Hiroshi Yanagawa

Random multi-recombinant PCR for the construction of combinatorial protein libraries
Nucl. Acids Res. 2001 29: e97; doi:10.1093/nar/29.20.e97 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Heather A. Ferguson and James A. Goodrich

Expression and purification of recombinant human c-Fos/c-Jun that is highly active in DNA binding and transcriptional activation in vitro
Nucl. Acids Res. 2001 29: e98; doi:10.1093/nar/29.20.e98 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tone Berge, Stine L. Bergholtz, Kristin Brevik Andersson, and Odd S. Gabrielsen

A novel yeast system for in vivo selection of recognition sequences: defining an optimal c-Myb-responsive element
Nucl. Acids Res. 2001 29: e99; doi:10.1093/nar/29.20.e99 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Arnold H. Simons, Naomi Dafni, Iris Dotan, Yoram Oron, and Dan Canaani

Genetic synthetic lethality screen at the single gene level in cultured human cells
Nucl. Acids Res. 2001 29: e100; doi:10.1093/nar/29.20.e100 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Karen J. Bowman, Rachel Le Pla, Yves Guichard, Peter B. Farmer, and George D. D. Jones

Evaluation of phosphodiesterase I-based protocols for the detection of multiply damaged sites in DNA: the detection of abasic, oxidative and alkylative tandem damage in DNA oligonucleotides
Nucl. Acids Res. 2001 29: e101; doi:10.1093/nar/29.20.e101 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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