Nucleic Acids Research

Survey and Summary:

Yasuomi Takagi, Masaki Warashina, Wojciech J. Stec, Koichi Yoshinari, and Kazunari Taira

SURVEY AND SUMMARY: Recent advances in the elucidation of the mechanisms of action of ribozymes
Nucl. Acids Res. 2001 29: 1815-1834; doi:10.1093/nar/29.9.1815 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Articles:

Ganesh K. Agrawal, Hideki Kato, Munehiko Asayama, and Makoto Shirai

An AU-box motif upstream of the SD sequence of light-dependent psbA transcripts confers mRNA instability in darkness in cyanobacteria
Nucl. Acids Res. 2001 29: 1835-1843; doi:10.1093/nar/29.9.1835 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Aditi Das, Arindam Dasgupta, Shalini Sharma, Monidipa Ghosh, Tanushri Sengupta, Santu Bandopadhyay, and Hemanta K. Majumder

Characterisation of the gene encoding type II DNA topoisomerase from Leishmania donovani: a key molecular target in antileishmanial therapy
Nucl. Acids Res. 2001 29: 1844-1851; doi:10.1093/nar/29.9.1844 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Aleksandra Muratovska, Robert N. Lightowlers, Robert W. Taylor, Douglass M. Turnbull, Robin A. J. Smith, Jacqueline A. Wilce, Stephen W. Martin, and Michael P. Murphy

Targeting peptide nucleic acid (PNA) oligomers to mitochondria within cells by conjugation to lipophilic cations: implications for mitochondrial DNA replication, expression and disease
Nucl. Acids Res. 2001 29: 1852-1863; doi:10.1093/nar/29.9.1852 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

A. P. Walsh, M. R. Tock, M. H. Mallen, V. R. Kaberdin, A. von Gabain, and K. J. McDowall

Cleavage of poly(A) tails on the 3'-end of RNA by ribonuclease E of Escherichia coli
Nucl. Acids Res. 2001 29: 1864-1871; doi:10.1093/nar/29.9.1864 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

C. Féral, G. Guellaën, and A. Pawlak

Human testis expresses a specific poly(A)-binding protein
Nucl. Acids Res. 2001 29: 1872-1883; doi:10.1093/nar/29.9.1872 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Lurdes Queimado, Malini Rao, Roger A. Schultz, Eugene V. Koonin, L. Aravind, Tiziana Nardo, Miria Stefanini, and Errol C. Friedberg

Cloning the human and mouse MMS19 genes and functional complementation of a yeast mms19 deletion mutant
Nucl. Acids Res. 2001 29: 1884-1891; doi:10.1093/nar/29.9.1884 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Andrew Loria and Tao Pan

Modular construction for function of a ribonucleoprotein enzyme: the catalytic domain of Bacillus subtilis RNase P complexed with B.subtilis RNase P protein
Nucl. Acids Res. 2001 29: 1892-1897; doi:10.1093/nar/29.9.1892 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Thierry Gourlain, Alexander Sidorov, Nathalie Mignet, Simon J. Thorpe, Sarah E. Lee, Jane A Grasby, and David M. Williams

Enhancing the catalytic repertoire of nucleic acids. II. Simultaneous incorporation of amino and imidazolyl functionalities by two modified triphosphates during PCR
Nucl. Acids Res. 2001 29: 1898-1905; doi:10.1093/nar/29.9.1898 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Alain A. Mir, Trevor J. Lockett, and Philip Hendry

Identifying ribozyme-accessible sites using NUH triplet-targeting gapmers
Nucl. Acids Res. 2001 29: 1906-1914; doi:10.1093/nar/29.9.1906 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Data] [Request Permissions]  

Irina Calin-Jageman, Asoka K. Amarasinghe, and Allen W. Nicholson

Ethidium-dependent uncoupling of substrate binding and cleavage by Escherichia coli ribonuclease III
Nucl. Acids Res. 2001 29: 1915-1925; doi:10.1093/nar/29.9.1915 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

David K. Orren, Amrita Machwe, Parimal Karmakar, Jason Piotrowski, Marcus P. Cooper, and Vilhelm A. Bohr

A functional interaction of Ku with Werner exonuclease facilitates digestion of damaged DNA
Nucl. Acids Res. 2001 29: 1926-1934; doi:10.1093/nar/29.9.1926 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Melanie D. Keppler, Stephen Neidle, and Keith R. Fox

Stabilisation of TG- and AG-containing antiparallel DNA triplexes by triplex-binding ligands
Nucl. Acids Res. 2001 29: 1935-1942; doi:10.1093/nar/29.9.1935 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Xi Wang and Robert T. Simpson

Chromatin structure mapping in Saccharomyces cerevisiae in vivo with DNase I
Nucl. Acids Res. 2001 29: 1943-1950; doi:10.1093/nar/29.9.1943 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Karen Brown, Elizabeth A. Guenther, Karen H. Dingley, Monique Cosman, Chris A. Harvey, Sharon J. Shields, and Kenneth W. Turteltaub

Synthesis and spectroscopic characterization of site-specific 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine oligodeoxyribonucleotide adducts
Nucl. Acids Res. 2001 29: 1951-1959; doi:10.1093/nar/29.9.1951 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

R. A. El-Awady, E. Dikomey, and J. Dahm-Daphi

Heat effects on DNA repair after ionising radiation: hyperthermia commonly increases the number of non-repaired double-strand breaks and structural rearrangements
Nucl. Acids Res. 2001 29: 1960-1966; doi:10.1093/nar/29.9.1960 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tapas K. Hazra, James G. Muller, Raymond C. Manuel, Cynthia J. Burrows, R. Stephen Lloyd, and Sankar Mitra

Repair of hydantoins, one electron oxidation product of 8-oxoguanine, by DNA glycosylases of Escherichia coli
Nucl. Acids Res. 2001 29: 1967-1974; doi:10.1093/nar/29.9.1967 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yukiko Matsumoto, Qiu-Mei Zhang, Masashi Takao, Akira Yasui, and Shuji Yonei

Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA
Nucl. Acids Res. 2001 29: 1975-1981; doi:10.1093/nar/29.9.1975 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

William J. Montigny, Christopher R. Houchens, Sharon Illenye, Jonathan Gilbert, Emily Coonrod, Young-Chae Chang, and Nicholas H. Heintz

Condensation by DNA looping facilitates transfer of large DNA molecules into mammalian cells
Nucl. Acids Res. 2001 29: 1982-1988; doi:10.1093/nar/29.9.1982 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Shinsuke Kaku, Yuki Iwahashi, Aiko Kuraishi, Amador Albor, Takehiro Yamagishi, Shiro Nakaike, and Molly Kulesz-Martin

Binding to the naturally occurring double p53 binding site of the Mdm2 promoter alleviates the requirement for p53 C-terminal activation
Nucl. Acids Res. 2001 29: 1989-1993; doi:10.1093/nar/29.9.1989 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Manabu Yasui, Saburo Matsui, Masaru Ihara, Y. R. Santosh Laxmi, Shinya Shibutani, and Tomonari Matsuda

Translesional synthesis on a DNA template containing N²-methyl-2'-deoxyguanosine catalyzed by the Klenow fragment of Escherichia coli DNA polymerase I
Nucl. Acids Res. 2001 29: 1994-2001; doi:10.1093/nar/29.9.1994 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Michael W. Pfaffl

A new mathematical model for relative quantification in real-time RT–PCR
Nucl. Acids Res. 2001 29: e45; doi:10.1093/nar/29.9.e45 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Corrigendum:

Corrigendum
Nucl. Acids Res. 2001 29: 0; doi:10.1093/nar/29.9.0 [Print PDF] [Request Permissions]  

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