Nucleic Acids Research

Survey and Summary:

Brian W. Kirk, Matthew Feinsod, Reyna Favis, Richard M. Kliman, and Francis Barany

Single nucleotide polymorphism seeking long term association with complex disease
Nucl. Acids Res. 2002 30: 3295-3311; doi:10.1093/nar/gkf466 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Articles:

Philippe Prochasson, Cécile Delouis, and Olivier Brison

Transcriptional deregulation of the keratin 18 gene in human colon carcinoma cells results from an altered acetylation mechanism
Nucl. Acids Res. 2002 30: 3312-3322; doi:10.1093/nar/gkf462 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Giuseppe Villani, Nicolas Tanguy Le Gac, Luc Wasungu, Dominique Burnouf, Robert P. Fuchs, and Paul E. Boehmer

Effect of manganese on in vitro replication of damaged DNA catalyzed by the herpes simplex virus type-1 DNA polymerase
Nucl. Acids Res. 2002 30: 3323-3332; doi:10.1093/nar/gkf463 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Maria G. Kapetanaki, Thanasis G. Loukeris, Ioannis Livadaras, and Charalambos Savakis

High frequencies of Minos transposon mobilization are obtained in insects by using in vitro synthesized mRNA as a source of transposase
Nucl. Acids Res. 2002 30: 3333-3340; doi:10.1093/nar/gkf455 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Vasiliy M. Petrov and Jim D. Karam

RNA determinants of translational operator recognition by the DNA polymerases of bacteriophages T4 and RB69
Nucl. Acids Res. 2002 30: 3341-3348; doi:10.1093/nar/gkf447 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Astrid R. W. Schröder and Detlev Riesner

Detection and analysis of hairpin II, an essential metastable structural element in viroid replication intermediates
Nucl. Acids Res. 2002 30: 3349-3359; doi:10.1093/nar/gkf454 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tracy Farrer, A. Brock Roller, W. James Kent, and Alan M. Zahler

Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing
Nucl. Acids Res. 2002 30: 3360-3367; doi:10.1093/nar/gkf465 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Marco Regalia, Magnus Alm Rosenblad, and Tore Samuelsson

Prediction of signal recognition particle RNA genes
Nucl. Acids Res. 2002 30: 3368-3377; doi:10.1093/nar/gkf468 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Gavin C. Conant and Andreas Wagner

GenomeHistory: a software tool and its application to fully sequenced genomes
Nucl. Acids Res. 2002 30: 3378-3386; doi:10.1093/nar/gkf449 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Séverine Chambeyron, Christine Brun, Stéphanie Robin, Alain Bucheton, and Isabelle Busseau

Chimeric RNA transposition intermediates of the I factor produce precise retrotransposed copies
Nucl. Acids Res. 2002 30: 3387-3394; doi:10.1093/nar/gkf456 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Paul Bundock, Haico van Attikum, and Paul Hooykaas

Increased telomere length and hypersensitivity to DNA damaging agents in an Arabidopsis KU70 mutant
Nucl. Acids Res. 2002 30: 3395-3400; doi:10.1093/nar/gkf445 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Daniel R. Gallie

The 5'-leader of tobacco mosaic virus promotes translation through enhanced recruitment of eIF4F
Nucl. Acids Res. 2002 30: 3401-3411; doi:10.1093/nar/gkf457 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tomasz J. Sarnowski, Szymon Swiezewski, Katarzyna Pawlikowska, Szymon Kaczanowski, and Andrzej Jerzmanowski

AtSWI3B, an Arabidopsis homolog of SWI3, a core subunit of yeast Swi/Snf chromatin remodeling complex, interacts with FCA, a regulator of flowering time
Nucl. Acids Res. 2002 30: 3412-3421; doi:10.1093/nar/gkf458 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Min Wu, Shixiang Yan, Dinshaw J. Patel, Nicholas E. Geacintov, and Suse Broyde

Relating repair susceptibility of carcinogen-damaged DNA with structural distortion and thermodynamic stability
Nucl. Acids Res. 2002 30: 3422-3432; doi:10.1093/nar/gkf427 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

I. Liebich, J. Bode, I. Reuter, and E. Wingender

Evaluation of sequence motifs found in scaffold/matrix-attached regions (S/MARs)
Nucl. Acids Res. 2002 30: 3433-3442; doi:10.1093/nar/gkf446 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Izumi Miyabe, Qiu-Mei Zhang, Katsuhito Kino, Hiroshi Sugiyama, Masashi Takao, Akira Yasui, and Shuji Yonei

Identification of 5-formyluracil DNA glycosylase activity of human hNTH1 protein
Nucl. Acids Res. 2002 30: 3443-3448; doi:10.1093/nar/gkf460 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Dean Laslett, Bjorn Canback, and Siv Andersson

BRUCE: a program for the detection of transfer-messenger RNA genes in nucleotide sequences
Nucl. Acids Res. 2002 30: 3449-3453; doi:10.1093/nar/gkf459 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Fabien Delacôte, Mingguang Han, Thomas D. Stamato, Maria Jasin, and Bernard S. Lopez

An xrcc4 defect or Wortmannin stimulates homologous recombination specifically induced by double-strand breaks in mammalian cells
Nucl. Acids Res. 2002 30: 3454-3463; doi:10.1093/nar/gkf452 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Melanie Gulston, Jonathan Fulford, Terry Jenner, Catherine de Lara, and Peter O’Neill

Clustered DNA damage induced by radiation in human fibroblasts (HF19), hamster (V79-4) cells and plasmid DNA is revealed as Fpg and Nth sensitive sites
Nucl. Acids Res. 2002 30: 3464-3472; doi:10.1093/nar/gkf467 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Shoji J. Ohuchi, Yoshiya Ikawa, Hideaki Shiraishi, and Tan Inoue

Modular engineering of a Group I intron ribozyme
Nucl. Acids Res. 2002 30: 3473-3480; doi:10.1093/nar/gkf453 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kevin E. Ashelford, Andrew J. Weightman, and John C. Fry

PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database
Nucl. Acids Res. 2002 30: 3481-3489; doi:10.1093/nar/gkf450 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Wayland Lim and J. David Furlow

Ribozyme suppression of endogenous thyroid hormone receptor activity in Xenopus laevis cells
Nucl. Acids Res. 2002 30: 3490-3496; doi:10.1093/nar/gkf461 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Stéphanie Le Hellard, Stéphane J. Ballereau, Peter M. Visscher, Helen S. Torrance, Jeni Pinson, Stewart W. Morris, Marian L. Thomson, Colin A. M. Semple, Walter J. Muir, Douglas H. R. Blackwood, David J. Porteous, and Kathryn L. Evans

SNP genotyping on pooled DNAs: comparison of genotyping technologies and a semi automated method for data storage and analysis
Nucl. Acids Res. 2002 30: e74; doi:10.1093/nar/gnf070 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Deirdre O’Meara, Afshin Ahmadian, Jacob Odeberg, and Joakim Lundeberg

SNP typing by apyrase-mediated allele-specific primer extension on DNA microarrays
Nucl. Acids Res. 2002 30: e75; doi:10.1093/nar/gnf074 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Ester Inbar, Benjamin Yakir, and Ariel Darvasi

An efficient haplotyping method with DNA pools
Nucl. Acids Res. 2002 30: e76; doi:10.1093/nar/gnf075 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Gang-Ping Xue

Characterisation of the DNA-binding profile of barley HvCBF1 using an enzymatic method for rapid, quantitative and high-throughput analysis of the DNA-binding activity
Nucl. Acids Res. 2002 30: e77; doi:10.1093/nar/gnf076 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Helenia Ansuini, Carla Cicchini, Alfredo Nicosia, Marco Tripodi, Riccardo Cortese, and Alessandra Luzzago

Biotin-tagged cDNA expression libraries displayed on lambda phage: a new tool for the selection of natural protein ligands
Nucl. Acids Res. 2002 30: e78; doi:10.1093/nar/gnf077 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

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