Nucleic Acids Research

Articles:

Neocles B. Leontis, Jesse Stombaugh, and Eric Westhof

The non-Watson–Crick base pairs and their associated isostericity matrices
Nucl. Acids Res. 2002 30: 3497-3531; doi:10.1093/nar/gkf481 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Lars E. T. Jansen, Ana I. Belo, Rinske Hulsker, and Jaap Brouwer

Transcription elongation factor Spt4 mediates loss of phosphorylated RNA polymerase II transcription in response to DNA damage
Nucl. Acids Res. 2002 30: 3532-3539; doi:10.1093/nar/gkf475 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Emmanuelle Fabre, Bernard Dujon, and Guy-Franck Richard

Transcription and nuclear transport of CAG/CTG trinucleotide repeats in yeast
Nucl. Acids Res. 2002 30: 3540-3547; doi:10.1093/nar/gkf483 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Natalia Gromak and Christopher W. J. Smith

A splicing silencer that regulates smooth muscle specific alternative splicing is active in multiple cell types
Nucl. Acids Res. 2002 30: 3548-3557; doi:10.1093/nar/gkf480 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Keiko Kita, Junko Tsuda, and Shin-ya Nakai

C.EcoO109I, a regulatory protein for production of EcoO109I restriction endonuclease, specifically binds to and bends DNA upstream of its translational start site
Nucl. Acids Res. 2002 30: 3558-3565; doi:10.1093/nar/gkf477 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Dong-Hyun Lee, Timothy R. O’Connor, and Gerd P. Pfeifer

Oxidative DNA damage induced by copper and hydrogen peroxide promotes CGTT tandem mutations at methylated CpG dinucleotides in nucleotide excision repair-deficient cells
Nucl. Acids Res. 2002 30: 3566-3573; doi:10.1093/nar/gkf478 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Shu-Yun Le, Kaizhong Zhang, and Jacob V. Maizel, Jr

RNA molecules with structure dependent functions are uniquely folded
Nucl. Acids Res. 2002 30: 3574-3582; doi:10.1093/nar/gkf473 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Parimal Karmakar, Carey M. Snowden, Dale A. Ramsden, and Vilhelm A. Bohr

Ku heterodimer binds to both ends of the Werner protein and functional interaction occurs at the Werner N-terminus
Nucl. Acids Res. 2002 30: 3583-3591; doi:10.1093/nar/gkf482 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Isabelle Callebaut, Despina Moshous, Jean-Paul Mornon, and Jean-Pierre de Villartay

Metallo-ß-lactamase fold within nucleic acids processing enzymes: the ß-CASP family
Nucl. Acids Res. 2002 30: 3592-3601; doi:10.1093/nar/gkf470 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Ulla Aapola, Ingrid Liiv, and Pärt Peterson

Imprinting regulator DNMT3L is a transcriptional repressor associated with histone deacetylase activity
Nucl. Acids Res. 2002 30: 3602-3608; doi:10.1093/nar/gkf474 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hiroaki Kawasaki and Kazunari Taira

A functional gene discovery in the Fas-mediated pathway to apoptosis by analysis of transiently expressed randomized hybrid-ribozyme libraries
Nucl. Acids Res. 2002 30: 3609-3614; doi:10.1093/nar/gkf476 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Donald Hamelberg, Loren Dean Williams, and W. David Wilson

Effect of a neutralized phosphate backbone on the minor groove of B-DNA: molecular dynamics simulation studies
Nucl. Acids Res. 2002 30: 3615-3623; doi:10.1093/nar/gkf472 [Abstract] [FREE Full Text] [Print PDF] [Supplementary material] [Request Permissions]  

Sikandar G. Khan, Vanessa Muniz-Medina, Tala Shahlavi, Carl C. Baker, Hiroki Inui, Takahiro Ueda, Steffen Emmert, Thomas D. Schneider, and Kenneth H. Kraemer

The human XPC DNA repair gene: arrangement, splice site information content and influence of a single nucleotide polymorphism in a splice acceptor site on alternative splicing and function
Nucl. Acids Res. 2002 30: 3624-3631; doi:10.1093/nar/gkf469 [Abstract] [FREE Full Text] [Print PDF] [Supplementary material] [Request Permissions]  

Qiang Hu, Marcel B. Bally, and Thomas D. Madden

Subcellular trafficking of antisense oligonucleotides and down-regulation of bcl-2 gene expression in human melanoma cells using a fusogenic liposome delivery system
Nucl. Acids Res. 2002 30: 3632-3641; doi:10.1093/nar/gkf448 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:

Frank Diehl, Boris Beckmann, Nadine Kellner, Nicole C. Hauser, Susanne Diehl, and Jörg D. Hoheisel

Manufacturing DNA microarrays from unpurified PCR products
Nucl. Acids Res. 2002 30: e79; doi:10.1093/nar/gnf078 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Christoph Wiesner, Martina Hoeth, Bernd R. Binder, and Rainer de Martin

A functional screening assay for the isolation of transcription factors
Nucl. Acids Res. 2002 30: e80; doi:10.1093/nar/gnf079 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Michael Bonin, Rong Zhu, Yvonne Klaue, Jürgen Oberstrass, Egbert Oesterschulze, and Wolfgang Nellen

Analysis of RNA flexibility by scanning force spectroscopy
Nucl. Acids Res. 2002 30: e81; doi:10.1093/nar/gnf080 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Frederic Rosu, Valérie Gabelica, Claude Houssier, and Edwin De Pauw

Determination of affinity, stoichiometry and sequence selectivity of minor groove binder complexes with double-stranded oligodeoxynucleotides by electrospray ionization mass spectrometry
Nucl. Acids Res. 2002 30: e82; doi:10.1093/nar/gnf081 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Elisabeth Möncke-Buchner, Stefanie Reich, Merlind Mücke, Monika Reuter, Walter Messer, Erich E. Wanker, and Detlev H. Krüger

Counting CAG repeats in the Huntington’s disease gene by restriction endonuclease EcoP15I cleavage
Nucl. Acids Res. 2002 30: e83; doi:10.1093/nar/gnf082 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Paul Gaytán, Joel Osuna, and Xavier Soberón

Novel ceftazidime-resistance ß-lactamases generated by a codon-based mutagenesis method and selection
Nucl. Acids Res. 2002 30: e84; doi:10.1093/nar/gnf083 [Abstract] [FREE Full Text] [Print PDF] [Supplementary material] [Request Permissions]  

Sobin Kim, John R. Edwards, Liyong Deng, Wendy Chung, and Jingyue Ju

Solid phase capturable dideoxynucleotides for multiplex genotyping using mass spectrometry
Nucl. Acids Res. 2002 30: e85; doi:10.1093/nar/gnf084 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hongyue Dai, Michael Meyer, Sergey Stepaniants, Michael Ziman, and Roland Stoughton

Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays
Nucl. Acids Res. 2002 30: e86; doi:10.1093/nar/gnf085 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yoshinobu Kohara, Hideyuki Noda, Kazunori Okano, and Hideki Kambara

DNA probes on beads arrayed in a capillary, ‘Bead-array’, exhibited high hybridization performance
Nucl. Acids Res. 2002 30: e87; doi:10.1093/nar/gnf086 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Liping Sun and Thomas Kodadek

Removal of impurities from transcription factor preparations that alter their DNA-binding properties
Nucl. Acids Res. 2002 30: e88; doi:10.1093/nar/gnf087 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Erratum:

Erratum
Nucl. Acids Res. 2002 30: 3642; doi:10.1093/nar/gkf489 [Extract] [FREE Full Text] [Request Permissions]  

Corrigendum
Nucl. Acids Res. 2002 30: 3642; doi:10.1093/nar/gkf491 [Extract] [FREE Full Text] [Print PDF] [Request Permissions]  

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