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Contents: Volume 31, Number 17    September 1 2003    [Index by Author] 
      Down Articles
      Down NAR Methods Online
 


To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

Articles:Back

Niklas Schultz, Elena Lopez, Nasrollah Saleh-Gohari, and Thomas Helleday
Poly(ADP-ribose) polymerase (PARP-1) has a controlling role in homologous recombination
Nucl. Acids Res. 2003 31: 4959-4964; doi:10.1093/nar/gkg703 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Laura Tsujikawa, Michael Weinfield, and Linda J. Reha-Krantz
Differences in replication of a DNA template containing an ethyl phosphotriester by T4 DNA polymerase and Escherichia coli DNA polymerase I
Nucl. Acids Res. 2003 31: 4965-4972; doi:10.1093/nar/gkg722 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Alexandra Boutla, Christos Delidakis, and Martin Tabler
Developmental defects by antisense-mediated inactivation of micro-RNAs 2 and 13 in Drosophila and the identification of putative target genes
Nucl. Acids Res. 2003 31: 4973-4980; doi:10.1093/nar/gkg707 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Denise R. Clark, Wolfgang Zacharias, Luminita Panaitescu, and W. Glenn McGregor
Ribozyme-mediated REV1 inhibition reduces the frequency of UV-induced mutations in the human HPRT gene
Nucl. Acids Res. 2003 31: 4981-4988; doi:10.1093/nar/gkg725 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

O. V. Matveeva, D. H. Mathews, A. D. Tsodikov, S. A. Shabalina, R. F. Gesteland, J. F. Atkins, and S. M. Freier
Thermodynamic criteria for high hit rate antisense oligonucleotide design
Nucl. Acids Res. 2003 31: 4989-4994; doi:10.1093/nar/gkg710 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Stephanie S.-I Tseng-Rogenski, Jean-Leon Chong, Christopher B. Thomas, Shinichiro Enomoto, Judith Berman, and Tien-Hsien Chang
Functional conservation of Dhh1p, a cytoplasmic DExD/H-box protein present in large complexes
Nucl. Acids Res. 2003 31: 4995-5002; doi:10.1093/nar/gkg712 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Geneviève Girard, Andreas Roussis, Alexander P. Gultyaev, Cornelis W. A. Pleij, and Herman P. Spaink
Structural motifs in the RNA encoded by the early nodulation gene enod40 of soybean
Nucl. Acids Res. 2003 31: 5003-5015; doi:10.1093/nar/gkg721 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Neelima Mondal, Ye Zhang, Zophonias Jonsson, Suman Kumar Dhar, Madhu Kannapiran, and Jeffrey D. Parvin
Elongation by RNA polymerase II on chromatin templates requires topoisomerase activity
Nucl. Acids Res. 2003 31: 5016-5024; doi:10.1093/nar/gkg705 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Brett Beitzel and Frederic Bushman
Construction and analysis of cells lacking the HMGA gene family
Nucl. Acids Res. 2003 31: 5025-5032; doi:10.1093/nar/gkg684 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Daniel Boden, Oliver Pusch, Fredrick Lee, Lynne Tucker, Peter R. Shank, and Bharat Ramratnam
Promoter choice affects the potency of HIV-1 specific RNA interference
Nucl. Acids Res. 2003 31: 5033-5038; doi:10.1093/nar/gkg704 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Heike L. Garstka, Wolfgang E. Schmitt, Jeanette Schultz, Bettina Sogl, Barbara Silakowski, Acisclo Pérez-Martos, Julio Montoya, and Rudolf J. Wiesner
Import of mitochondrial transcription factor A (TFAM) into rat liver mitochondria stimulates transcription of mitochondrial DNA
Nucl. Acids Res. 2003 31: 5039-5047; doi:10.1093/nar/gkg717 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Michael J. Moser and James R. Prudent
Enzymatic repair of an expanded genetic information system
Nucl. Acids Res. 2003 31: 5048-5053; doi:10.1093/nar/gkg709 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tatsuya Kibe, Kazunori Tomita, Akira Matsuura, Daisuke Izawa, Tsutomu Kodaira, Takashi Ushimaru, Masahiro Uritani, and Masaru Ueno
Fission yeast Rhp51 is required for the maintenance of telomere structure in the absence of the Ku heterodimer
Nucl. Acids Res. 2003 31: 5054-5063; doi:10.1093/nar/gkg718 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Peter Meister, Mickaël Poidevin, Stefania Francesconi, Isabelle Tratner, Patrick Zarzov, and Giuseppe Baldacci
Nuclear factories for signalling and repairing DNA double strand breaks in living fission yeast
Nucl. Acids Res. 2003 31: 5064-5073; doi:10.1093/nar/gkg719 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Maria A. Xaplanteri, Athanasios Andreou, George P. Dinos, and Dimitrios L. Kalpaxis
Effect of polyamines on the inhibition of peptidyltransferase by antibiotics: revisiting the mechanism of chloramphenicol action
Nucl. Acids Res. 2003 31: 5074-5083; doi:10.1093/nar/gkg686 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Greg L. Olsen, Elizabeth A. Louie, Gary P. Drobny, and Snorri Th. Sigurdsson
Determination of DNA minor groove width in distamycin-DNA complexes by solid-state NMR
Nucl. Acids Res. 2003 31: 5084-5089; doi:10.1093/nar/gkg720 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Mark Odell, Lucy Malinina, Verl Sriskanda, Marianna Teplova, and Stewart Shuman
Analysis of the DNA joining repertoire of Chlorella virus DNA ligase and a new crystal structure of the ligase–adenylate intermediate
Nucl. Acids Res. 2003 31: 5090-5100; doi:10.1093/nar/gkg665 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Besik I. Kankia
Mg2+-induced triplex formation of an equimolar mixture of poly(rA) and poly(rU)
Nucl. Acids Res. 2003 31: 5101-5107; doi:10.1093/nar/gkg698 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Xiang-Jun Lu and Wilma K. Olson
3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures
Nucl. Acids Res. 2003 31: 5108-5121; doi:10.1093/nar/gkg680 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Jason D. Marshall, Edith M. Hessel, Josh Gregorio, Christina Abbate, Priscilla Yee, Mabel Chu, Gary Van Nest, Robert L. Coffman, and Karen L. Fearon
Novel chimeric immunomodulatory compounds containing short CpG oligodeoxyribonucleotides have differential activities in human cells
Nucl. Acids Res. 2003 31: 5122-5133; doi:10.1093/nar/gkg700 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jeff M. Zimmerman and L. James Maher III
Solution measurement of DNA curvature in papillomavirus E2 binding sites
Nucl. Acids Res. 2003 31: 5134-5139; doi:10.1093/nar/gkg697 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Teresa Corona, Qiuye Bao, Nicole Christ, Thomas Schwartz, Jinming Li, and Peter Dröge
Activation of site-specific DNA integration in human cells by a single chain integration host factor
Nucl. Acids Res. 2003 31: 5140-5148; doi:10.1093/nar/gkg711 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sara Richter, Barbara Gatto, Daniele Fabris, Ken-ichi Takao, Susumu Kobayashi, and Manlio Palumbo
Clerocidin alkylates DNA through its epoxide function: evidence for a fine tuned mechanism of action
Nucl. Acids Res. 2003 31: 5149-5156; doi:10.1093/nar/gkg696 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jingfang Ju, Chunli Huang, Stacey A. Minskoff, Jane E. Mayotte, Bruce E. Taillon, and Jan F. Simons
Simultaneous gene expression analysis of steady-state and actively translated mRNA populations from osteosarcoma MG-63 cells in response to IL-1{alpha} via an open expression analysis platform
Nucl. Acids Res. 2003 31: 5157-5166; doi:10.1093/nar/gkg702 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Bechan Sharma, Neerja Kaushik, Alok Upadhyay, Snehlata Tripathi, Kamalendra Singh, and Virendra N. Pandey
A positively charged side chain at position 154 on the ß8–{alpha}E loop of HIV-1 RT is required for stable ternary complex formation
Nucl. Acids Res. 2003 31: 5167-5174; doi:10.1093/nar/gkg708 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Sun Yong Jeong, Annkatrin Rose, and Iris Meier
MFP1 is a thylakoid-associated, nucleoid-binding protein with a coiled-coil structure
Nucl. Acids Res. 2003 31: 5175-5185; doi:10.1093/nar/gkg693 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Hendrik Huthoff, Katarzyna Bugala, Jan Barciszewski, and Ben Berkhout
On the importance of the primer activation signal for initiation of tRNAlys3-primed reverse transcription of the HIV-1 RNA genome
Nucl. Acids Res. 2003 31: 5186-5194; doi:10.1093/nar/gkg714 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Yoshihito Niimura, Mahito Terabe, Takashi Gojobori, and Kin-ichiro Miura
Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes
Nucl. Acids Res. 2003 31: 5195-5201; doi:10.1093/nar/gkg701 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Isabelle Salles-Passador, Anil Munshi, Dominique Cannella, Vincent Pennaneach, Stephane Koundrioukoff, Michel Jaquinod, Eric Forest, Vladimir Podust, Arun Fotedar, and Rati Fotedar
Phosphorylation of the PCNA binding domain of the large subunit of replication factor C on Thr506 by cyclin-dependent kinases regulates binding to PCNA
Nucl. Acids Res. 2003 31: 5202-5211; doi:10.1093/nar/gkg692 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Alexander E. Vinogradov
Isochores and tissue-specificity
Nucl. Acids Res. 2003 31: 5212-5220; doi:10.1093/nar/gkg699 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

NAR Methods Online:Back

Xu Gang Xia, Hongxia Zhou, Hongliu Ding, El Bashir Affar, Yang Shi, and Zuoshang Xu
An enhanced U6 promoter for synthesis of short hairpin RNA
Nucl. Acids Res. 2003 31: e100; doi:10.1093/nar/gng098 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Kari J. Airenne, Erik Peltomaa, Vesa P. Hytönen, Olli H. Laitinen, and Seppo Ylä-Herttuala
Improved generation of recombinant baculovirus genomes in Escherichia coli
Nucl. Acids Res. 2003 31: e101; doi:10.1093/nar/gng102 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Dieter Hüsken, Fred Asselbergs, Bernd Kinzel, Francois Natt, Jan Weiler, Pierre Martin, Robert Häner, and Jonathan Hall
mRNA fusion constructs serve in a general cell-based assay to profile oligonucleotide activity
Nucl. Acids Res. 2003 31: e102; doi:10.1093/nar/gng103 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Johan Banér, Anders Isaksson, Erik Waldenström, Jonas Jarvius, Ulf Landegren, and Mats Nilsson
Parallel gene analysis with allele-specific padlock probes and tag microarrays
Nucl. Acids Res. 2003 31: e103; doi:10.1093/nar/gng104 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Jun Nakamura, Shoji Asakura, Susan D. Hester, Gilbert de Murcia, Keith W. Caldecott, and James A. Swenberg
Quantitation of intracellular NAD(P)H can monitor an imbalance of DNA single strand break repair in base excision repair deficient cells in real time
Nucl. Acids Res. 2003 31: e104; doi:10.1093/nar/gng105 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

Tzachi Bar, Anders Ståhlberg, Anders Muszta, and Mikael Kubista
Kinetic Outlier Detection (KOD) in real-time PCR
Nucl. Acids Res. 2003 31: e105; doi:10.1093/nar/gng106 [Abstract] [FREE Full Text] [Print PDF] [Supplementary Material] [Request Permissions]  

Lisa Herron-Olson, John Freeman, Qing Zhang, Ernest F. Retzel, and Vivek Kapur
MGView: an alignment and visualization tool to enhance gap closure of microbial genomes
Nucl. Acids Res. 2003 31: e106; doi:10.1093/nar/gng107 [Abstract] [FREE Full Text] [Print PDF] [Request Permissions]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.