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Previous Next 		Contents: Volume 34, Number 15, September 2006    [Index by Author] 
      Down Editorial
      Down Survey and Summary
      Down Molecular Biology
      Down Nucleic Acid Enzymes
      Down RNA
      Down Methods Online
 

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To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

Editorial:Back

Patrick Linder and Steve Kowalczykowski
Helicases and NTP-Driven Nucleic Acid Machines: Structure, Function and Roles in Human Disease
Nucl. Acids Res. 2006 34: 4081; doi:10.1093/nar/gkl524 [Extract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Survey and Summary:Back

Jacob E. Corn and James M. Berger
Regulation of bacterial priming and daughter strand synthesis through helicase-primase interactions
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4082-4088; doi:10.1093/nar/gkl363 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Steven W. Matson and Adam B. Robertson
The UvrD helicase and its modulation by the mismatch repair protein MutL
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4089-4097; doi:10.1093/nar/gkl450 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Michael P. Killoran and James L. Keck
Sit down, relax and unwind: structural insights into RecQ helicase mechanisms
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4098-4105; doi:10.1093/nar/gkl538 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Jennifer A. Cobb and Lotte Bjergbaek
RecQ helicases: lessons from model organisms
Nucleic Acids Research Advance Access published on August 26, 2006
Nucl. Acids Res. 2006 34: 4106-4114; doi:10.1093/nar/gkl557 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Wolf-Dietrich Heyer, Xuan Li, Michael Rolfsmeier, and Xiao-Ping Zhang
Rad54: the Swiss Army knife of homologous recombination?
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4115-4125; doi:10.1093/nar/gkl481 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Ellen Fanning, Vitaly Klimovich, and Andrew R. Nager
A dynamic model for replication protein A (RPA) function in DNA processing pathways
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4126-4137; doi:10.1093/nar/gkl550 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Marina N. Nedelcheva-Veleva, Dragomir B. Krastev, and Stoyno S. Stoynov
Coordination of DNA synthesis and replicative unwinding by the S-phase checkpoint pathways
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4138-4146; doi:10.1093/nar/gkl528 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Jean-Baptiste Boulé and Virginia A. Zakian
Roles of Pif1-like helicases in the maintenance of genomic stability
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4147-4153; doi:10.1093/nar/gkl561 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Samuel G. Mackintosh and Kevin D. Raney
DNA unwinding and protein displacement by superfamily 1 and superfamily 2 helicases
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4154-4159; doi:10.1093/nar/gkl501 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Harald Dürr, Andrew Flaus, Tom Owen-Hughes, and Karl-Peter Hopfner
Snf2 family ATPases and DExx box helicases: differences and unifying concepts from high-resolution crystal structures
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4160-4167; doi:10.1093/nar/gkl540 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Patrick Linder
Dead-box proteins: a family affair—active and passive players in RNP-remodeling
Nucleic Acids Research Advance Access published on August 26, 2006
Nucl. Acids Res. 2006 34: 4168-4180; doi:10.1093/nar/gkl468 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Eckhard Jankowsky and Heath Bowers
Remodeling of ribonucleoprotein complexes with DExH/D RNA helicases
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4181-4188; doi:10.1093/nar/gkl410 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Isabelle Iost and Marc Dreyfus
DEAD-box RNA helicases in Escherichia coli
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4189-4197; doi:10.1093/nar/gkl500 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Kuan-Teh Jeang and Venkat Yedavalli
Role of RNA helicases in HIV-1 replication
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4198-4205; doi:10.1093/nar/gkl398 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Frances V. Fuller-Pace
DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4206-4215; doi:10.1093/nar/gkl460 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Ilker Donmez and Smita S. Patel
Mechanisms of a ring shaped helicase
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4216-4224; doi:10.1093/nar/gkl508 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Ivan Rasnik, Sua Myong, and Taekjip Ha
Unraveling helicase mechanisms one molecule at a time
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4225-4231; doi:10.1093/nar/gkl452 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Timothée Lionnet, Alexandre Dawid, Sarah Bigot, François-Xavier Barre, Omar A. Saleh, François Heslot, Jean-François Allemand, David Bensimon, and Vincent Croquette
DNA mechanics as a tool to probe helicase and translocase activity
Nucleic Acids Research Advance Access published on August 25, 2006
Nucl. Acids Res. 2006 34: 4232-4244; doi:10.1093/nar/gkl451 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Molecular Biology:Back

Nisheeth Agarwal and Anil K. Tyagi
Mycobacterial transcriptional signals: requirements for recognition by RNA polymerase and optimal transcriptional activity
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4245-4257; doi:10.1093/nar/gkl521 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Beatrice Cobucci-Ponzano, Fiorella Conte, Dario Benelli, Paola Londei, Angela Flagiello, Maria Monti, Piero Pucci, Mosè Rossi, and Marco Moracci
The gene of an archaeal {alpha}-L-fucosidase is expressed by translational frameshifting
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4258-4268; doi:10.1093/nar/gkl574 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Nucleic Acid Enzymes:Back

Kevin D. Corbett and James M. Berger
Structural basis for topoisomerase VI inhibition by the anti-Hsp90 drug radicicol
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4269-4277; doi:10.1093/nar/gkl567 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

RNA:Back

Sara N. Richter, François Bélanger, Ping Zheng, and Tariq M. Rana
Dynamics of nascent mRNA folding and RNA–protein interactions: an alternative TAR RNA structure is involved in the control of HIV-1 mRNA transcription
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4278-4292; doi:10.1093/nar/gkl499 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Martine Roovers, Caryn Hale, Catherine Tricot, Michael P. Terns, Rebecca M. Terns, Henri Grosjean, and Louis Droogmans
Formation of the conserved pseudouridine at position 55 in archaeal tRNA
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4293-4301; doi:10.1093/nar/gkl530 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Clark M. Henderson, Christine B. Anderson, and Michael T. Howard
Antisense-induced ribosomal frameshifting
Nucleic Acids Research Advance Access published on August 18, 2006
Nucl. Acids Res. 2006 34: 4302-4310; doi:10.1093/nar/gkl531 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Supplementary Data] [Request Permissions]  

Methods Online:Back

Julian P. Venables and John Burn
EASI—enrichment of alternatively spliced isoforms
Nucleic Acids Research Advance Access published on September 1, 2006
Nucl. Acids Res. 2006 34: e103; doi:10.1093/nar/gkl592 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Anthony Maxwell, Nicolas P. Burton, and Natasha O'Hagan
High-throughput assays for DNA gyrase and other topoisomerases
Nucleic Acids Research Advance Access published on August 26, 2006
Nucl. Acids Res. 2006 34: e104; doi:10.1093/nar/gkl504 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Supplementary Data] [Request Permissions]  

Diana Abdueva, Dmitriy Skvortsov, and Simon Tavaré
Non-linear analysis of GeneChip arrays
Nucleic Acids Research Advance Access published on August 26, 2006
Nucl. Acids Res. 2006 34: e105; doi:10.1093/nar/gkl435 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

H.-C. Yang, Y.-J. Liang, M.-C. Huang, L.-H. Li, C.-H. Lin, J.-Y. Wu, Y.-T. Chen, and C.S.J. Fann
A genome-wide study of preferential amplification/hybridization in microarray-based pooled DNA experiments
Nucleic Acids Research Advance Access published on August 23, 2006
Nucl. Acids Res. 2006 34: e106; doi:10.1093/nar/gkl446 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

The following two papers have been published in previous 2006 issues of NAR. They are included here with the rest of the Helicase Collection.
George W. Owttrim
RNA helicases and abiotic stress
Nucl. Acids Res. 2006 34: 3220-3230; doi:10.1093/nar/gkl408 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

Andrew Weston and John Sommerville
Xp54 and related (DDX6-like) RNA helicases: roles in messenger RNP assembly, translation regula\ tion and RNA degradation
Nucl. Acids Res. 2006 34: 3082-3094; doi:10.1093/nar/gkl409 [Abstract] [FREE Full Text] [Print PDF][Screen PDF] [Request Permissions]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.